Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12 149 1e-30 seq25 120 7e-22 seq17 102 2e-16 seq3 102 2e-16 >seq12 Length=625618 Score = 149 bits (164), Expect = 1e-30 Identities = 176/237 (74%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || | ||| ||||||||||| ||||||||||| ||||||| |||||| Sbjct 614866 CTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCGGATAAAGTC 614925 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| ||||| ||| || || ||||| || || |||||||| | | || ||| Sbjct 614926 CTACCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCT 614985 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || ||||| ||| ||||| | || | | | || ||| || ||||| ||| Sbjct 614986 TCTTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAAGATTCCACTTCCAGA 615045 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCTA 152119 || || ||||| || || |||||||| ||||| | |||||| ||| |||| |||| Sbjct 615046 GTGATCGTTTTACCGGTCAGAGTCTTGACGAAAATCTGCATACCACCTCTTAGTCTA 615102 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || | ||| ||||||||||| ||||| ||||| ||||||| |||||| Sbjct 615759 CTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTC 615818 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || ||||| || || ||||| ||||| | || || ||||| | | || ||| Sbjct 615819 CTACCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCT 615878 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || ||||| ||| ||||| | || | | | || ||| || || || | Sbjct 615879 TCTTTATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAG 615938 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || || || |||||||| ||||| | |||||| Sbjct 615939 GTAATAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT 615979 Score = 100 bits (110), Expect = 7e-16 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||| || ||||||||||||||||||| || ||||| |||||||| | Sbjct 512600 CAAG-TGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGACAACGTTCTACCATCTTCCA 512542 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | ||| |||||||| || |||| Sbjct 512541 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGAA 512482 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | | |||| || || || || ||||| || || || | Sbjct 512481 TCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCTAGAGTGATGGTCTTAC 512422 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | |||||| || | | ||||||| Sbjct 512421 CAGTCAAAGTCTTGAC--AAAACTGCATT 512395 >seq25 Length=339617 Score = 120 bits (132), Expect = 7e-22 Identities = 166/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || || || |||||||| || || |||||||||||||| | | ||||| || Sbjct 150093 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 150152 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || || || || ||||| || || || ||||| | | || || ||||| Sbjct 150153 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 150212 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| ||| ||||| | || | | |||| ||| ||| ||||| | ||| || Sbjct 150213 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 150272 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||| || || |||||||| ||||| | ||||| ||| |||| ||| Sbjct 150273 AGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCATACCACCTCTTAATCT 150323 Score = 104 bits (114), Expect = 5e-17 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || || |||||||||||||| | |||||||| || ||||| | Sbjct 150330 CAAG-TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACCGTCTTCCA 150388 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || || || | ||||| ||||||| | || ||||| || ||||| Sbjct 150389 GTTGCTTT--CCAGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCGTTGTCTTG 150446 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || ||| || || | || | | | || ||| || || || | |||||||| || Sbjct 150447 GATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAATAGTCTT 150506 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||| | |||||| Sbjct 150507 ACCAGTCAAAGTCTTAACGAAAATCTGCAT 150536 Score = 102 bits (112), Expect = 2e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||||||||| |||||||||||||| | | |||||| || ||||| | Sbjct 149874 CAAG-TGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCTTCCA 149932 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || || || | ||||| ||||| | | || |||||||| || |||| Sbjct 149933 ATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAA 149992 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | | || ||| || ||||| | ||| || ||||| | Sbjct 149993 TTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTTTTAC 150052 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 | || | || ||||| |||| ||||| ||| |||| ||| Sbjct 150053 CAGTCAAGGTTTTCACAAAGATTTGCATACCACCTCTTAATCT 150095 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/199 (70%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||| || |||||||||||||| || | || ||||| |||||||| | Sbjct 41181 CAAG-TGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACCATCTTCCA 41123 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | || || ||||| | | ||| |||||||| || |||| Sbjct 41122 ATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGAA 41063 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | | |||| || || || || | ||| || || || | Sbjct 41062 TCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGTCTTAC 41003 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | || | |||||| || || Sbjct 41002 CAGTCAAAGTCTTGACAAA 40984 >seq17 Length=530849 Score = 102 bits (112), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | || | || || || |||||||||||||| |||| || ||||| || Sbjct 311525 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 311466 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || ||||| | || || ||||| | | ||| |||||||| Sbjct 311465 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 311406 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| || |||||| | || | |||| ||| || || || || ||||| Sbjct 311405 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 311346 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| | |||||| || || | |||||| Sbjct 311345 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 311310 >seq3 Length=965618 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | || | || || || |||||||||||||| |||| || ||||| || Sbjct 656589 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 656648 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || ||||| | || || ||||| | | ||| || ||||| Sbjct 656649 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 656708 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| || |||||| | || | |||| ||| || ||||| || ||||| Sbjct 656709 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 656768 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || ||||| | |||||| || || | |||||| || Sbjct 656769 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 656807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153817547667620