Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq12 131 1e-25 seq25 123 2e-23 seq17 100 2e-16 seq3 91.5 1e-13 >seq12 Length=625618 Score = 131 bits (144), Expect = 1e-25 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| || |||| || || || ||||||||| ||||| || Sbjct 615746 TTGCATACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATA 615805 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| | | |||| ||||| ||||| ||||||||||| || | || || || Sbjct 615806 ATCGGATAAAGTCCTACCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTC 615865 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | |||||| || ||| ||||| ||| | | | ||||| |||| || Sbjct 615866 TGGAGGAATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGA 615925 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTG 44343 ||| ||||||| ||||| ||||| || || || ||||| ||||| || ||||| || || Sbjct 615926 TTCAACCTCCAAGGTAATAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCATAATATG 615985 Query 44344 AA 44345 || Sbjct 615986 AA 615987 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| || |||| || || || ||||||||||||||| || Sbjct 614853 TTGCATACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATA 614912 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| | | | || || || || || || |||||||| | | ||||| || Sbjct 614913 ATCGGATAAAGTCCTACCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTC 614972 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | |||||| || ||| ||||| ||| | | | ||||| |||| || Sbjct 614973 AGGTGGAATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAAGA 615032 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| |||| || ||||| || || || || ||||| ||||| || ||||| Sbjct 615033 TTCCACTTCCAGAGTGATCGTTTTACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| ||| | |||| ||| | || ||||||||||||||||||||| Sbjct 512623 ATACCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCG 512564 Query 44168 GCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | ||| | | || |||| ||||| || ||||||||||| | || || || | Sbjct 512563 GACAACGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 512506 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | ||||||||| ||| ||||| ||| | | | |||||||| | ||||| Sbjct 512505 GTGGGATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATT 512446 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 | ||||| | || || ||||| || || | ||||| || || Sbjct 512445 CGACCTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 512403 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| ||||| || |||| ||| | || |||||||| ||||| || || | Sbjct 614632 CCACCTCTTAGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGAT 614691 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || || | || || || ||||| || |||||||| | | ||||| || | | Sbjct 614692 AA--GGTTCTACCATCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTG 614749 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || ||||| ||| || ||| | |||||||| | ||||||| Sbjct 614750 GAATACCTTCCTTGTCTTGAATCTTTGACTT-AACGTTGTCGATGGTGTCAGAGGATTCC 614808 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || || || || || || || ||||| ||||||||||| Sbjct 614809 ACCTCTAAAGTGATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 614858 >seq25 Length=339617 Score = 123 bits (136), Expect = 2e-23 Identities = 182/252 (72%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| |||| |||||| ||| ||||| ||||||||||| Sbjct 150303 TTGCATACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTA 150362 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| | |||| | |||| ||||| ||||| || ||||| ||||| | ||| || Sbjct 150363 ATCAGACAAAGTT--CTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGG 150420 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280 || | ||| | |||||| || || ||||| || | || ||| | ||||| || | Sbjct 150421 TCCGGAGGAATACCTTCGTTGTCTTGGATCTT-TGACTTAACGTTGTCGATGGTATCAGA 150479 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||||| ||||||| ||||| ||||| || || | ||||| ||||| || ||||| || Sbjct 150480 AGATTCAACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCATAAT 150539 Query 44341 GTGAA--TGAAA 44350 | || ||||| Sbjct 150540 ATCAAACTGAAA 150551 Score = 107 bits (118), Expect = 1e-18 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG- 44168 ||| ||||| ||||| || |||| ||| || || ||| || |||||||||||||| | Sbjct 149853 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 149912 Query 44169 -CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 ||||| | |||| |||| ||||| || ||||| ||||| | ||| || || | | Sbjct 149913 CAGAGTT--CTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGA 149970 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTC 44286 || | ||||||||| ||| | | || | || || || | || || || | ||||| Sbjct 149971 GGAATACCTTCCTTGTCC-TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTC 150029 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| || || || || || || | ||| ||||| ||||||||||| Sbjct 150030 CACTTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 150080 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | ||| | |||||||| || || ||||| ||||||||||| Sbjct 150075 TTGCATACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTA 150134 Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| | || || || | || || || ||||| || |||||||| | | || || Sbjct 150135 ATCAGACAG--GGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGG 150192 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | ||| ||||| ||| ||||| ||| | | | |||||||||| Sbjct 150193 TCTGGAGGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAA 150252 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | || || || || || || || ||||| ||||| |||||||| Sbjct 150253 GACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 150308 >seq17 Length=530849 Score = 100 bits (110), Expect = 2e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| ||| | |||| ||| | ||| ||||||||||||||||| |||| | Sbjct 311536 CCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 311477 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | | | || |||| ||||| || ||||||||||| | || || || | || Sbjct 311476 AAGGTTCTAC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 311418 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||||||||| ||| ||||| ||| || ||| | || ||||| | ||||| Sbjct 311417 GATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGT--CGATAGTGTCAGAAGATTCA 311360 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||| ||||| ||||| | ||||| || || || ||||| Sbjct 311359 ACCTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 311310 >seq3 Length=965618 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| ||| | |||| ||| | ||| ||||||||||||||||| |||| | Sbjct 656578 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 656637 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | | | || |||| ||||| || ||||||||||| | || || || | || Sbjct 656638 AAGGTTCTAC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 656696 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||| ||||| ||| ||||| ||| || ||| | || ||||| | ||||| Sbjct 656697 GATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTCA 656754 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| ||||| | ||||| || || || ||||| Sbjct 656755 ACTTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 656804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989434775740