Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq12 197 3e-45 seq25 152 1e-31 seq17 131 4e-25 seq3 118 3e-21 seq5 111 4e-19 >seq12 Length=625618 Score = 197 bits (218), Expect = 3e-45 Identities = 175/219 (80%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || || ||||||||||| || || |||||| || || Sbjct 615083 CAGATTTTCGTCAAGACTCTGACCGGTAAAACGATCACTCTGGAAGTGGAATCTTCCGAT 615024 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||| |||||||| || || || ||||||||| Sbjct 615023 ACCATCGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCACCTGACCAGCAA 614964 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || ||||| || || ||||| |||||| | ||||||||||| || Sbjct 614963 AGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGGACTTTATCCGATTATAACATC 614904 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || |||||| | ||||| ||||| ||| Sbjct 614903 CAAAAGGAGTCTACTCTGCATTTGGTTTTAAGACTAAGA 614865 Score = 170 bits (188), Expect = 5e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || || || || || ||| | ||||| ||| || || Sbjct 615976 CAGATTTTCGTTAAGACTCTAACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCCGAT 615917 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||| |||||||| || ||||| ||||| ||| Sbjct 615916 ACCATTGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACCAACAA 615857 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| ||||| || || || ||||| || |||||| | ||||||||||| | Sbjct 615856 AGATTAATCTTTGCCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATAACATT 615797 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || |||||| | ||||| ||||| ||| Sbjct 615796 CAAAAGGAGTCTACTCTGCATTTGGTTTTAAGACTAAGA 615758 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||||||||| || || ||||| ||||| | ||||||||| ||| ||| Sbjct 614855 CAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCTGAC 614796 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||||||| ||||| ||||| || || || ||||||||| Sbjct 614795 ACCATCGACAACGTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 614736 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || || ||||| || || | | || |||||| | Sbjct 614735 AGACTAATCTTTGCGGGTAAGCAACTAGAGGATGGTAGAACCTTATCTGACTATAACATT 614676 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| || | || | ||||| ||||| ||| Sbjct 614675 CAAAAGGAATCTACCTTACACTTGGTTTTAAGACTAAGA 614637 Score = 152 bits (168), Expect = 1e-31 Identities = 150/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||||||||| || || ||||| ||||| | ||||||||| ||| ||| Sbjct 615748 CAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCTGAC 615689 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||||||| ||||| ||||| || || || ||||||||| Sbjct 615688 ACCATCGACAACGTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 615629 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || || ||||| || || | | || |||||| || Sbjct 615628 AGACTAATCTTTGCGGGTAAGCAACTAGAGGATGGTAGAACCTTATCTGACTATAACATC 615569 Query 178104 CAAAAAGAATCAAC 178117 || || ||||| || Sbjct 615568 CAGAAGGAATCTAC 615555 Score = 143 bits (158), Expect = 6e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| || || ||| | || || || || ||||| || ||||| ||| ||| |||||||| Sbjct 512402 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCAT 512461 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || |||||||| ||||||||||||||| ||||| ||||| || ||||| ||| || | Sbjct 512462 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 512521 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || || | |||||||| || || | ||||||| ||| ||||||| Sbjct 512522 GATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCCGATTACAACATCCAAAA 512581 Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || |||| | ||| | ||| | ||| Sbjct 512582 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGA 512615 >seq25 Length=339617 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||||| || || ||||| ||||| | || || || || ||| Sbjct 150305 CAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCCGAC 150246 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||| || || || || ||||| ||||| ||| Sbjct 150245 ACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAACAA 150186 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || || ||||| || || || | ||||| ||| || Sbjct 150185 AGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAACATC 150126 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || ||||| || ||| | ||| | ||| Sbjct 150125 CAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGA 150087 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| || || ||| | || || || || ||||| | ||||| ||| ||| |||||||| Sbjct 40983 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCAT 41042 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || |||||||| ||||||||||||||| ||||| ||||| || ||||| ||| || | Sbjct 41043 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 41102 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| || || || | |||||||| || || | | || || ||| ||||||| Sbjct 41103 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 41162 Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || |||| | ||| | ||| | ||| Sbjct 41163 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGA 41196 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| | || || ||||| ||||| | || |||||| || || Sbjct 150077 CAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCTGAT 150018 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||||||||| ||||| || ||||| ||||| || Sbjct 150017 ACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAACAG 149958 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || || || | ||||| || || ||||| | ||||| ||| || Sbjct 149957 AGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATC 149898 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||||| || || ||||| | ||||| ||||| ||| Sbjct 149897 CAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGA 149859 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||| | || || || || || ||| | ||||| ||| || || Sbjct 150533 CAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCTGAT 150474 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||| || ||||| ||||| || ||||||||||| || Sbjct 150473 ACCATCGACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGACCAACAG 150414 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || ||||| || || ||||| || || ||| | | ||||| ||| || Sbjct 150413 AGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAACATC 150354 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || || || | || |||||| | ||| Sbjct 150353 CAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGA 150315 >seq17 Length=530849 Score = 131 bits (144), Expect = 4e-25 Identities = 155/206 (75%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||| | || || || || || ||||| ||||| ||| || ||| Sbjct 311313 CAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCTGAC 311372 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||||||||| ||||| ||||| || ||||| ||| Sbjct 311373 ACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAA 311432 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || || | |||||||| || || |||| |||| || ||| | Sbjct 311433 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAAC-CTTGTCCGACTACAACAT 311491 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 |||||| ||||| || |||| |||| Sbjct 311492 CCAAAAGGAATCCACCTTGCA-CTTG 311516 >seq3 Length=965618 Score = 118 bits (130), Expect = 3e-21 Identities = 152/206 (74%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||| | || || || || || ||||| || || ||| || ||| Sbjct 656801 CAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTCTGAC 656742 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || ||||| || ||||| ||| Sbjct 656741 ACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAACAA 656682 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || || | |||||||| || || |||| |||| || ||| | Sbjct 656681 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAAC-CTTGTCCGACTACAACAT 656623 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 |||||| ||||| || |||| |||| Sbjct 656622 CCAAAAGGAATCCACCTTGCA-CTTG 656598 >seq5 Length=930498 Score = 111 bits (122), Expect = 4e-19 Identities = 315/476 (66%), Gaps = 10/476 (2%) Strand=Plus/Minus Query 254468 TCTGCGACTTTTCTCAAATAGTTGTGTCTTTTTTCTTTTCGAAGTCTTTCGAACCGGAGG 254527 ||||| || ||||||| |||||||||||||||||| | || || | | | || || | | Sbjct 473032 TCTGCCACCTTTCTCACATAGTTGTGTCTTTTTTCCTCTCTTAGACGTGCAAAACGCATG 472973 Query 254528 GCTGACTGTCCTCCTCGACCGTGTTTCTTTGGGAGAGACACATCAAAA---GACAAAAGC 254584 || || || || |||| ||||||||||||||| ||| ||| | |||| | || | | Sbjct 472972 GCAGATTGACCACCTCTACCGTGTTTCTTTGGTAGATCCAC-TGAAAATTTGTGAAGAAC 472914 Query 254585 GTTGTCCTTGTGCTTCCAGAAAGAGTCGCAAAGAGAG-CCCCTGAGCCATCCACAATAAT 254643 | || || ||| | || ||||| | |||| | | |||||| ||||||| || || Sbjct 472913 G--GTTCTAGTGTTACCGGAAAGCGAACCAAACAATGATCCCTGA-CCATCCATAACGAT 472857 Query 254644 AAAGCCGTATGTTTTGTCGTCGTACAAAAGCTCTTTGAGACAATCCGTGTGAAAGACATT 254703 || ||| || | | ||| | | || || || ||| || || || || || Sbjct 472856 GAAACCGAATTTGTCATCGGCTTCCAGCAGTTCGGATAGAACTTCGGTATGGAATTTGTT 472797 Query 254704 ATCACAAGCGTACACTTTTTGGCTTATCGGACGGAAAGGTTCGACGTCGAATGCCACTTT 254763 |||||| || | | | | || || ||||||| | || || | ||||| Sbjct 472796 ATCACACAAATATAGGGATGTGTTGATTGGTTTATAAGGTTCAATATCAAAGGTGACTTT 472737 Query 254764 CTTCTCTTTGCCTTCAGGAAGCATCACTGTC-CCACTAAAAATAACGAGGCCGTTTTCGG 254822 ||| || || ||||| | || | | || |||| | ||||| | || ||| | Sbjct 472736 CTTTTCCTTACCTTCTTCATTGATGA-TATCACCACAGTAGATAACTAACCCATTTGGTG 472678 Query 254823 GGACTTTCGACAAGAGTTTTAGCTTTTGCTGGCATGAAACAATTGCCCCAAGAACGGAGA 254882 | ||||| | | |||||||| ||||| ||| ||| ||| || | |||||| | Sbjct 472677 GAACTTTAGTGTAAAGTTTTAGTTTTTGTTGGGTGGAAGTAATGGCAGATAAAACGGACA 472618 Query 254883 GCCTGTTTACCCTCGACTTGATATTCGATGCCGTTCCGTGTTCGTTTGTCAACATT 254938 | | |||||| ||||| ||||| || ||||| || || | ||| | ||| |||||| Sbjct 472617 GACGGTTTACTCTCGATTTGATGTTAGATGCAGTACCATATTCATCTGTTAACATT 472562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727806982680