Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq30 107 2e-18 seq51 98.7 9e-16 >seq30 Length=1378366 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || | || || ||||| || || ||| || | | Sbjct 148774 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 148715 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| ||| ||| ||||| || ||| | || ||| ||| Sbjct 148714 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 148655 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||||| |||||||| || || ||||| || ||| || ||| || | |||||||| Sbjct 148654 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 148595 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||||||||||| ||| |||| || ||||| |||| || Sbjct 148594 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGAGGTGG 148548 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || |||||| | ||| ||| ||||| ||||| || ||||| || |||||| | ||| Sbjct 148909 GACAAGGAAGGTATTCCCCCAGACCAACAGAGACTAATTTTTGCTGGTAAACAATTAGAA 148850 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 || | |||| || | |||||||| |||||||||||||||||||| ||| |||| || Sbjct 148849 GACGGTAGAACTCTGTCTGATTACAACATTCAGAAGGAATCTACTCTGCACTTGGTCTTG 148790 Query 29175 CGATTACGAGGAGG 29188 ||||| |||| || Sbjct 148789 AGATTAAGAGGTGG 148776 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || | || || ||||| || || ||| || | | Sbjct 149458 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 149399 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| ||| ||| || || |||||| | || || ||| Sbjct 149398 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 149339 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||||| || ||||| || || || ||||||||| || ||| | | ||||||||| Sbjct 149338 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 149279 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||||||||||| ||| |||| || || || |||| || Sbjct 149278 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGG 149232 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || ||||| || || || |||||| || ||| | | Sbjct 149686 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 149627 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | ||||| ||| || || || |||||| | || || ||| Sbjct 149626 GATACCATCAACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGACCAA 149567 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | || ||||| || || ||||||||||| | |||| || | |||||||| Sbjct 149566 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 149507 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||||| ||||||||| |||| || ||||| |||| || Sbjct 149506 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGG 149460 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || |||||||| | || ||| ||||| ||| | || ||||| || || ||||| || Sbjct 149137 GACAAAGAAGGCATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGTAAGCAACTTGAG 149078 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| || |||| | | |||||||| || ||||||||||||||||||||| |||| || Sbjct 149077 GATGGCAGAACTTTATCTGATTACAACATCCAGAAGGAATCTACTCTTCACTTGGTTCTA 149018 Query 29175 CGATTACGAGGAGG 29188 || || |||| || Sbjct 149017 AGACTAAGAGGTGG 149004 >seq51 Length=425556 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||||||| | || ||| ||||||||| | |||||||| || || ||||||||| Sbjct 155309 GATAAAGAAGGTATTCCTCCAGACCAACAAAGATTAATCTTTGCCGGTAAGCAACTGGAA 155250 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 || | ||| | ||||||| || ||||| ||||| |||||||| || |||| ||| Sbjct 155249 GACGGTAGGACTTTATCCGATTATAACATTCAAAAGGAGTCTACTCTGCATTTGGTTTTA 155190 Query 29175 CGATTACGAGGAGG 29188 || || |||| || Sbjct 155189 AGACTAAGAGGTGG 155176 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || |||||| | || || ||||||||| | |||||||| || || ||| ||||| Sbjct 52786 GACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 52845 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| || |||||||||| || || |||||||||||| | ||| |||| || Sbjct 52846 GATGGTAGAACGTTGTCCGATTACAACATCCAAAAGGAATCTACTTTGCACTTGGTTCTA 52905 Query 29175 CGATTACGAGGAGG 29188 |||| |||| || Sbjct 52906 AGATTGAGAGGTGG 52919 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | ||||| | || || ||||| || || || |||| || | Sbjct 155174 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 155115 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| ||| ||| || || |||||| | || || || Sbjct 155114 GACACCATCGACAACGTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 155055 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||||| |||||||| || |||||||| || ||| | ||| | | || || || Sbjct 155054 CAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGAACCTTATCTGACTATAAC 154995 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| ||||||||||| | ||| |||| ||| || || |||| || Sbjct 154994 ATTCAAAAGGAATCTACCTTACACTTGGTTTTAAGACTAAGAGGTGG 154948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335310914460