Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq30 107 2e-18 seq35 104 2e-17 seq51 102 7e-17 seq9 98.7 8e-16 >seq30 Length=1378366 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | ||| ||| ||||| ||||| || ||||| || |||||||| ||| Sbjct 148909 GACAAGGAAGGTATTCCCCCAGACCAACAGAGACTAATTTTTGCTGGTAAACAATTAGAA 148850 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 || | |||| || | |||||||| ||||| |||||||||||||| ||| |||| || Sbjct 148849 GACGGTAGAACTCTGTCTGATTACAACATTCAGAAGGAATCTACTCTGCACTTGGTCTTG 148790 Query 25248 CGATTACGAGGAGG 25261 ||||| |||| || Sbjct 148789 AGATTAAGAGGTGG 148776 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || | || || ||||| || || ||| || | | Sbjct 148774 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 148715 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||||| ||| ||| ||||| || ||| | || ||| ||| Sbjct 148714 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 148655 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||||| |||||||| || || ||| | || ||| || ||| || | |||||||| Sbjct 148654 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 148595 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || |||||||||||||| ||| |||| || ||||| |||| || Sbjct 148594 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGAGGTGG 148548 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | ||||| ||||| || |||||||| || ||| |||| | | Sbjct 148546 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 148487 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | || |||||| || || |||||| | || || ||| Sbjct 148486 GATACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 148427 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||| | || ||||| || || ||||||||||| | |||| || | |||||||| Sbjct 148426 CAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAAC 148367 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || || || |||||||| ||| |||| ||| || || |||| || Sbjct 148366 ATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGG 148320 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107 |||| || ||||| || || ||||| || || ||| || | || || | | | Sbjct 39314 TCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCATTGACA 39373 Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 | ||||| ||| ||| || || |||||| | || || ||||||||| | |||| Sbjct 39374 ACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTAATCT 39433 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 | || || || |||||||||||| | ||| || | || ||||| || |||||||||| Sbjct 39434 TCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAAGGAAT 39493 Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| | ||| |||| || |||| |||| || Sbjct 39494 CTACTTTGCACTTGGTTCTAAGATTGAGAGGTGG 39527 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || | || || ||||| || || ||| || | | Sbjct 149458 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 149399 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||||| ||| ||| || || |||||| | || || ||| Sbjct 149398 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 149339 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||||| || ||||| || || || |||||||| || ||| | | ||||||||| Sbjct 149338 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 149279 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || |||||||||||||| ||| |||| || || || |||| || Sbjct 149278 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGG 149232 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || |||||||| | || ||| ||||| ||| | || ||||| || || ||| | || Sbjct 149137 GACAAAGAAGGCATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGTAAGCAACTTGAG 149078 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| || |||| | | |||||||| || || |||||||||||||||||| |||| || Sbjct 149077 GATGGCAGAACTTTATCTGATTACAACATCCAGAAGGAATCTACTCTTCACTTGGTTCTA 149018 Query 25248 CGATTACGAGGAGG 25261 || || |||| || Sbjct 149017 AGACTAAGAGGTGG 149004 >seq35 Length=1454894 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || ||||| || || |||| || |||||||| || ||||||||| ||| ||| | Sbjct 309125 AAGATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCT 309184 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | | || ||||| || ||| || || || ||| | || || Sbjct 309185 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGAC 309244 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 ||||||||| | |||||||| || || |||||||||||| | ||| || |||| ||| Sbjct 309245 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 309304 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || ||||||||||| || | ||| |||| || |||| |||| || Sbjct 309305 AACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGG 309354 >seq51 Length=425556 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107 |||| || ||||| || || ||||| || || ||| || | || || | | | Sbjct 52706 TCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCATTGACA 52765 Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 | ||||| ||| ||| || || |||||| | || || ||||||||| | |||| Sbjct 52766 ACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 52825 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 |||| || || |||||||||||| | ||| || |||||||||| || |||||||||| Sbjct 52826 TTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCCGATTACAACATCCAAAAGGAAT 52885 Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| | ||| |||| || |||| |||| || Sbjct 52886 CTACTTTGCACTTGGTTCTAAGATTGAGAGGTGG 52919 Score = 102 bits (112), Expect = 7e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 25111 TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTG 25170 ||||| ||| ||| |||||||||||| | || ||| ||||||||| | ||||||| Sbjct 155326 TCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACCAACAAAGATTAATCTTTG 155267 Query 25171 CGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTA 25230 | || || ||| ||||||| | ||| | ||||||| || ||||||||||| |||| Sbjct 155266 CCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATAACATTCAAAAGGAGTCTA 155207 Query 25231 CTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||| || |||| ||| || || |||| || Sbjct 155206 CTCTGCATTTGGTTTTAAGACTAAGAGGTGG 155176 >seq9 Length=1454246 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || |||| || |||||||| || ||||||||| || ||| | | Sbjct 306884 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 306943 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || ||||| || ||| || || |||||| | || || ||| Sbjct 306944 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAA 307003 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | |||||||| || || |||||||||||| | ||| || |||| ||||| Sbjct 307004 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAAC 307063 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||| || | ||| |||| | |||| |||| || Sbjct 307064 ATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGG 307110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796139130648