Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq30 122 1e-22 seq51 111 2e-19 >seq30 Length=1378366 Score = 122 bits (134), Expect = 1e-22 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 ||||||||| |||||||| ||||| || | |||||| ||||| || || ||||| || Sbjct 148319 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 148378 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 |||||||| | || || ||||| || || |||||||||||||| || || || ||||| Sbjct 148379 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 148438 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 ||| ||||| || || || |||||| ||| ||| || Sbjct 148439 AATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 148498 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||| | ||||| |||||||| || || ||||| | || |||||||| Sbjct 148499 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 148546 Score = 116 bits (128), Expect = 6e-21 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || | ||||||||| || || || ||||| || Sbjct 148776 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 148835 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || ||||||||||| ||||||||||| | ||| || || || || ||| Sbjct 148836 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 148895 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || ||||| ||||| ||| ||| ||| Sbjct 148896 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 148955 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || || ||||| || ||||| |||| || |||| ||| |||||||| Sbjct 148956 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 149002 Score = 116 bits (128), Expect = 6e-21 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||||| ||||| || | ||||||||| || || || ||||| || Sbjct 149004 CCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAT 149063 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||||| ||| || | ||| || || |||||||||||||| || || || |||||| Sbjct 149064 AAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGA 149123 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| || || |||||| ||| ||| ||| Sbjct 149124 ATGCCTTCTTTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACT 149183 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | ||||| || ||||| |||| || |||| ||| || ||||| Sbjct 149184 TCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 149230 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || | ||| ||||| || || || ||||| || Sbjct 149460 CCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 149519 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||| | || || | ||| |||||||||||||||||||| || || ||||||||| Sbjct 149520 AAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGAGGA 149579 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 149580 ATACCTTCGTTGTCTTG 149596 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||||| ||||| || | ||||||||| || ||||| ||||| || Sbjct 149232 CCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGAT 149291 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||||| ||| || | || || ||||||||||||| ||| || || || || ||| Sbjct 149292 AGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGA 149351 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 149352 ATACCTTCCTTGTCCTG 149368 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||||| ||||| || ||||||||||| || || || || || || Sbjct 39527 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 39468 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| || ||||| || ||||| || || |||||||| || || || || Sbjct 39467 AACGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGG 39408 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 39407 ATACCTTCCTTGTCCTG 39391 >seq51 Length=425556 Score = 111 bits (122), Expect = 2e-19 Identities = 109/138 (79%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| |||||||| |||||||| | |||||| || ||| || || |||||||| || Sbjct 155176 CCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGA-ATGTTATAATCGGA 155234 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| || | || || | ||| || || ||||| || |||||||| || || ||||| Sbjct 155235 TAAAGTCCTACCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGG 155294 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| ||||||||||| || Sbjct 155295 AATACCTTCTTTATCCTG 155312 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||||| ||||| || ||||||||||| || || || ||||| || Sbjct 52919 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGAC 52860 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| || ||||| || |||||||| ||||||||||| || || || || Sbjct 52859 AACGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 52800 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 52799 ATACCTTCCTTGTCCTG 52783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743525173181440