Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq30 199 4e-46 seq52 158 1e-33 >seq30 Length=1378366 Score = 199 bits (220), Expect = 4e-46 Identities = 544/825 (66%), Gaps = 11/825 (1%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 || ||||| ||| |||||| || ||||||||||| || || || ||| || || || Sbjct 665188 TTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTACCGGCTAGAGAGATGTTC 665247 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063 |||||||| || || || ||| | ||||||||| || || | ||| || Sbjct 665248 TCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCATTACCAAGAGCCACCAGA 665307 Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123 | ||| || || ||||| || | || || ||||||| | |||||| || | | Sbjct 665308 AGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCGGCGTTCATGCCCAGCAGA 665367 Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttt-tCTATATTAACCGCTTCAATGATTAT 16182 || |||| || ||| | ||| || | || || || || |||||| | || || Sbjct 665368 GCCACGGGGAGAGCATCT-TCAAAGTATCTCTTCTCAATTGATACAGCTTCAGTAATGAT 665426 Query 16183 ATCTCTTACTACACTATTTA-AC--GGAGGGTTTAATAAGTGTTTAAACATTATACAAGC 16239 |||| | ||| | | | || || ||| || || || | || |||||| Sbjct 665427 ---TCTTTCCACAATGTCTGGACTTGGTCTGTTCTTCAAATGGGCGAATAATAGACAAGC 665483 Query 16240 AAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGG 16299 |||||| ||||| |||||||| |||| || || || || || || || | |||||| Sbjct 665484 AAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACCTGG 665543 Query 16300 CATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACC 16359 |||||| || || || | |||||| || || |||||||| || || ||||| | ||| Sbjct 665544 CATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAAACACC 665603 Query 16360 TTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcca 16419 ||| ||||||||||| || || |||| ||| | || | | | || ||||| Sbjct 665604 TTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTGAATCCA 665663 Query 16420 ttttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAA 16479 | | ||||| | ||| |||| || | ||||| || |||||||||||||| Sbjct 665664 CCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAAATAA 665723 Query 16480 ATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGA 16539 | | | |||| | | ||||| | | || ||||| || | || ||| |||| || Sbjct 665724 AAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGTTTCAGA 665783 Query 16540 ATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTAC 16599 ||| ||||| ||||| ||||| || || || ||||| |||| || | |||||| || Sbjct 665784 ATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTATTTGGAC 665843 Query 16600 TTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAA 16659 |||| | || | || | || || || ||||| || |||||| |||||||| || Sbjct 665844 CTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGCAAAGAA 665903 Query 16660 CGCAAGTATGTGTTTAATAAAAttttttt--CGTTATCTGAAAGTTTTA-ACCAGTCAGA 16716 ||| || | | ||| |||| | ||| | || || | | ||| ||| ||| Sbjct 665904 CGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTCCAATCATC 665963 Query 16717 AAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 ||||| || |||||||||| ||||| | |||||||| || || Sbjct 665964 CAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGC 666008 >seq52 Length=524665 Score = 158 bits (174), Expect = 1e-33 Identities = 567/871 (65%), Gaps = 23/871 (3%) Strand=Plus/Minus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 |||||||| ||||||||||| || || || ||| || || ||||||||||| || || Sbjct 253288 ACTCTCTTCTCAAAGAAATTGGTCTTACCCGCTAGAGAGATGTTTTCCATAAAGTCGAAT 253229 Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAA-TCTATCCGCCAC 16077 |||||| | | ||||| || ||| | |||| | || | || ||| || || || Sbjct 253228 GGATTTGTGACATTGTAGTACTTTTCGT-TACCAAGAGCCACTAGAAGTCTGTCGGCAAC 253170 Query 16078 AAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGC 16137 ||||| | || || ||||||| | |||||| || | | || |||| || Sbjct 253169 GAATTCGACGTATTGGTTCATTAGCGCGGCGTTCATGCCCAGCAGAGCCACGGGGAGAGC 253110 Query 16138 TTCTGTTAAAAAAttt-ttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACAC 16196 ||| | ||| || | ||||| || ||| |||||| | || || | || | ||| Sbjct 253109 ATCT-TCAAAGTATCTCTTTTCAATTGAAACAGCTTCAGTAATAATCT---TTTCCACAA 253054 Query 16197 TATTTA-ACGGAGGGTTTAAT--AAGTGTTTAAACATTATACAAGCAAAATCACAATGCA 16253 ||| | || | | | || ||||| || | || ||| ||||| || ||||| Sbjct 253053 TATCTGGACTTGGTCTGTGATTCAAGTGAGCGAATAATAGACAGGCAAAGTCGGTATGCA 252994 Query 16254 ATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTT 16313 | |||||||| || | || || ||||| || || || ||||||||||| || || | Sbjct 252993 AACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCATCAGACCCTTCT 252934 Query 16314 TTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAA 16373 | || | |||||| || || || || || || || ||||| ||||||||||||||||||| Sbjct 252933 TCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTTCAACTGCGGCAA 252874 Query 16374 ATGCAACCAATCGCTCACCGT-ACGTTCTAtttttactttctatccattttttagcccaa 16432 |||| || |||| ||| | | | | || | || | || ||||| | | ||||| Sbjct 252873 ATGCGACTAATCTTTCAGCATAAAGGGCT-TCTTCATCTTGAATCCACCTAATGGCCCAT 252815 Query 16433 tttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCT 16492 | ||| |||| | | | ||||| || || ||||||||||| ||| || Sbjct 252814 TCTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATTAAATAAGAAATCAGCCTCC 252755 Query 16493 TTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCC 16552 ||| || | | || ||||| || | ||| ||| |||| || || || || ||| Sbjct 252754 TTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAGTGGATGTTTTCC 252695 Query 16553 ATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAAC 16612 || || || || || || ||||| | ||||| | ||||| ||||| | | || Sbjct 252694 ATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAATTTGCACTTCGGCAGAGAAG 252635 Query 16613 CTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGT 16672 | || | || || || || || || || ||| || || || ||||| || | | Sbjct 252634 TTCTCGACCAAATTCTCATTCACAATACCGTCGGATGCAGCGAAGAACGCTAGAACTCTT 252575 Query 16673 TTAAT--AAAAttttt----ttCGTT-ATCTGAAAGTTTTAACCAGTCAGAAAAATCTTT 16725 ||| ||||| ||| ||||| |||| ||| | ||||||| ||||| | Sbjct 252574 GAAATGAAAAATCTTTCACCCTCGTTCATCT---TGTTGT-TCCAGTCATCCAAATCCTG 252519 Query 16726 TGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCA 16785 ||||||| |||||| | ||||| || || || | || | || || || ||| Sbjct 252518 CTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCTTCTGCTCTCTTGTAGGCTTGCCA 252459 Query 16786 TATGTCTTCGTAAACAATAGGAAACACAACA 16816 || || | ||| |||||| || | |||| Sbjct 252458 GATTTCGTGGTATTGAATAGGGAAAAGAACA 252428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511236855200