Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq30 181 1e-40 seq52 145 7e-30 >seq30 Length=1378366 Score = 181 bits (200), Expect = 1e-40 Identities = 577/885 (65%), Gaps = 11/885 (1%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 || ||||| ||| ||||||||| |||||||| ||||| ||||| | || || || || Sbjct 665188 TTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTACCGGCTAGAGAGATGTTC 665247 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032 |||||||| || ||||| ||||| || | ||| ||| ||| || | | || Sbjct 665248 TCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCATTACCAAGAGCCACCAGA 665307 Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092 | ||| || |||| ||||| | |||||| ||||| | ||||| || | || Sbjct 665308 AGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCGGCGTTCATGCCCAGCAGA 665367 Query 14093 TTTACAGGAATTATATTGGTTAAAAAT-TCTTTT-TCTATAGACACAGCCTCGTTTATAA 14150 || || | || || ||| | ||| || || || || ||||| || | || | Sbjct 665368 GCCACGGGGAGAGCATC--TTCAAAGTATCTCTTCTCAATTGATACAGCTTCAGTAATGA 665425 Query 14151 TAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 14210 | | | ||| || | || | || | ||| || | || ||| |||| Sbjct 665426 TTCTTTCCACAATGTCTGGACTTGGTCTGTTCTTCAAATGGGCGAATAATAGACAAGCAA 665485 Query 14211 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 14270 |||| || | || || ||||||| || | ||| || || || ||||| ||||||| Sbjct 665486 AATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACCTGGCA 665545 Query 14271 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 14330 | | || || || |||||||| || ||||| |||||||| || ||||| | || | Sbjct 665546 TTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAAACACCTT 665605 Query 14331 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCAT 14389 | ||||| ||||| || | ||||| ||| || | || | | || | || ||||| Sbjct 665606 CCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTGA-ATCCAC 665664 Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14449 | | |||||||| | |||| || || || ||||||| |||||||||||| Sbjct 665665 CTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAAATAAA 665724 Query 14450 TGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 14509 ||| | || | ||| | | |||| |||||||| | || ||| ||||||| Sbjct 665725 AATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGTTTCAGAA 665784 Query 14510 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14569 || || |||||||| ||||| || || || || || |||| || | ||| ||| Sbjct 665785 TGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTATTTGGACC 665844 Query 14570 TCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14628 || | || |||| | || ||||||| |||||||| |||||||| |||||||| || Sbjct 665845 TCAGCAGAGAAAT-TCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGCAAAGAA 665903 Query 14629 TGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGCTGAGTTTTTTCCAATCGGC 14685 || | | || ||| || || || ||||| | | || |||||||| | Sbjct 665904 CGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTCCAATCATC 665963 Query 14686 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATA 14745 |||||||| || | ||| | ||| ||| |||||||||| || | ||| | || || Sbjct 665964 CAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTCTCTTGTA 666023 Query 14746 CATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14790 | ||| ||||| | |||| || || |||| |||||||| Sbjct 666024 AGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAATCT 666068 >seq52 Length=524665 Score = 145 bits (160), Expect = 7e-30 Identities = 455/693 (66%), Gaps = 14/693 (2%) Strand=Plus/Minus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 ||||| || |||||||| || || ||||| | || || || ||||||||||| || ||| Sbjct 253288 ACTCTCTTCTCAAAGAAATTGGTCTTACCCGCTAGAGAGATGTTTTCCATAAAGTCGAAT 253229 Query 13988 GGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045 |||||||| ||||| | ||||| || ||| || | | ||| | ||| || |||| Sbjct 253228 GGATTTGT-GACATTGTAGTACTTT-TCGTTACCAAGAGCCACTAGAAGTCTGTCGGCAA 253171 Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105 ||| || | ||||| ||||| | ||||| || | || || || | Sbjct 253170 CGAATTCGACGTATTGGTTCATTAGCGCGGCGTTCATGCCCAGCAGAGCCACGGGGAGAG 253111 Query 14106 TATTGGTTAAAAAT-TCT-TTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAAT 14163 || || ||| | ||| ||||| || || ||||| || | ||||| | | ||| Sbjct 253110 CATC--TTCAAAGTATCTCTTTTCAATTGAAACAGCTTCAGTAATAATCTTTTCCACAAT 253053 Query 14164 TTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 14223 || | || | || | || || | || ||| ||||| || ||| | Sbjct 253052 ATCTGGACTTGGTCTGTGATTCAAGTGAGCGAATAATAGACAGGCAAAGTCGGTATGCAA 252993 Query 14224 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 || || ||||| | ||| | |||||| || || |||| |||||||||| || || Sbjct 252992 ACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCATCAGACCCTTCTT 252933 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 || |||||||| || |||||||| || || || ||||| || || |||||||| ||||| Sbjct 252932 CTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTTCAACTGCGGCAAA 252873 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATT 14402 || | ||||| ||| || | |||| || | | || ||||| | | ||||||| Sbjct 252872 TGCGACTAATCTTTCAGCATAAAGGGCTTCTTCATCTTGA-ATCCACCTAATGGCCCATT 252814 Query 14403 CAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTT 14462 | | |||| | | || || ||||||| ||||||||||| || ||| | Sbjct 252813 CTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATTAAATAAGAAATCAGCCTCCT 252754 Query 14463 T--AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14520 | ||| | | | |||| |||||||| | || ||| |||||||||| |||||||| Sbjct 252753 TGGAGTCCCT--ACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAGTGGATGTTTTC 252696 Query 14521 CATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAA 14580 ||| || || || || || || || | ||||| | ||| || || | | || Sbjct 252695 CATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAATTTGCACTTCGGCAGAGAA 252636 Query 14581 TCTTTCGGCCAAATTTTCATTAACTATACCATC 14613 | ||| ||||||| ||||| || ||||| || Sbjct 252635 GTTCTCGACCAAATTCTCATTCACAATACCGTC 252603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344804129760