Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01-
05] 132 sequences; 19,269,454 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq35 111 1e-19
seq9 111 1e-19
seq51 105 5e-18
seq30 100 2e-16
>seq35
Length=1454894
Score = 111 bits (122), Expect = 1e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| || |||| ||| | || ||||| ||||| ||||||||||||| || ||| |||
Sbjct 309343 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 309284
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||||||||| || || ||| |||| | ||||||||| || || | || |||||
Sbjct 309283 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 309224
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| ||| | |||||| | ||| ||||||| | || ||| | ||| ||
Sbjct 309223 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 309164
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
| | || || ||||| || || |||||||| ||||| ||
Sbjct 309163 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 309125
>seq9
Length=1454246
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
|||||| |||| ||| | || ||||| ||||| ||||||||||||| || ||| |||
Sbjct 307099 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 307040
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||||||||| || || ||| |||| | ||||||||| || || | ||||||||
Sbjct 307039 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 306980
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| ||| | |||||| | | | ||||||| | || || | ||| ||
Sbjct 306979 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 306920
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| | || || ||||| || || |||||||| |||||
Sbjct 306919 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 306884
>seq51
Length=425556
Score = 105 bits (116), Expect = 5e-18
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| || |||| ||| | || ||||| ||||| |||||||| |||| || ||| |||
Sbjct 52908 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGACAACGTTCTACC 52849
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||||||||| || || ||| |||| | ||||||||| || || | ||||||||
Sbjct 52848 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 52789
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| ||| | | |||||| | ||| |||||| || ||| || | |||||
Sbjct 52788 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCTAGAGTGAT 52729
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAA 18317
| | || || ||||| || || ||||||
Sbjct 52728 GGTCTTACCAGTCAAAGTCTTGACAAAA 52701
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || | |||||| | |||| ||| | || ||||| ||||||||||| ||||| |
Sbjct 154948 CCACCTCTTAGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGAT 155007
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| ||| || | |||||| || ||| |||| |||||||| || || ||
Sbjct 155008 AAGGTTCTACCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGA 155067
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| |||||||| || ||| | | ||| || | | | |||||| || ||
Sbjct 155068 ATACCTTCCTTGTCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACC 155127
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||||| |||| || || | ||||| ||||| ||||||||
Sbjct 155128 TCTAAAGTGATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 155174
>seq30
Length=1378366
Score = 100 bits (110), Expect = 2e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| || |||| ||| | || ||||| ||||| ||||||||||| | || ||| |||
Sbjct 39516 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 39457
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||||||||| || || || |||| | ||||||||| || || | ||||||||
Sbjct 39456 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 39397
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| ||| | | |||||| | ||| |||||| || ||| || | |||||
Sbjct 39396 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 39337
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAA 18317
| | || || ||||| || || ||||||
Sbjct 39336 GGTCTTACCAGTCAAAGTCTTGACAAAA 39309
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || | |||||| | |||| ||| || || || ||||| || |||||||| || |
Sbjct 148319 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 148378
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| ||| ||| ||||||||||| || || ||| | || | ||| ||||| || ||
Sbjct 148379 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 148438
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||| || ||||| || || | | | ||| ||| | ||
Sbjct 148439 AATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 148498
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | |||||| |||| || ||||| ||||| ||||| ||||||||
Sbjct 148499 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 148546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343389730340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |