Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq52 120 6e-22 seq35 91.5 3e-13 seq9 86.0 1e-11 >seq52 Length=524665 Score = 120 bits (132), Expect = 6e-22 Identities = 359/545 (66%), Gaps = 18/545 (3%) Strand=Plus/Plus Query 101820 TCTTGTTTAACGCTGCACAACACTTCCCCGCCATCA-AGAAGAAGGAGCAGTGGGCTATT 101878 |||| ||||| || || || |||| | |||| |||| | | || | ||||| ||| Sbjct 252766 TCTTATTTAATGCCATTGAAAACATCCCACCAATCAGAGAAAAGGCAGAA-TGGGCCATT 252824 Query 101879 AATTGGATGCAA-AGCAATAA--CGATTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTT 101935 | ||||| ||| | || || | || || ||| | | || || ||||| |||||| Sbjct 252825 AGGTGGATTCAAGATGAAGAAGCCCTTTATGCTGAAAGATTAGTCGCATTTGCCGCAGTT 252884 Query 101936 GAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATT 101995 ||||| |||||||| || | ||||| |||| || ||| | ||||| | |||| | Sbjct 252885 GAAGGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTG 252944 Query 101996 TTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGAC 102055 |||| ||||| |||| ||| || || || |||| || ||||||||| | ||| |||| Sbjct 252945 ATGCCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCATACCGAC 253004 Query 102056 TTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTG-ATACCCCATCAAGAGAAAGGATTCT 102114 ||||| |||| | | | | ||| || | | |||| | ||| | Sbjct 253005 TTTGC-------CTGTCTATTATTCGCTCACTTGAATCACAGACCAAGTCCAGATATTGT 253057 Query 102115 TGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAAGA-ATTTCTCACAGTTTCCCTGC 102170 ||| ||| | |||||||| || ||||||| |||| || | || | | || | Sbjct 253058 GGAAAAGATTATTACTGAAGCTGTTTCAATTGAA-AAGAGATACTTTGAAGATGCTCTCC 253116 Query 102171 CTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAG 102230 | || | |||| |||||| | | | |||| ||| ||| | ||||| || || | Sbjct 253117 CCGTGGCTCTGCTGGGCATGAACGCCGCGCTAATGAACCAATACGTCGAATTCGTTGCCG 253176 Query 102231 ATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCAT 102290 | | ||| | || | | || |||||| |||| ||||| || || || ||| | Sbjct 253177 ACAGACTTCTAGTGGCTCTTGGTAACGAAAAGTACTACAATGTCACAAATCCATTCGACT 253236 Query 102291 TCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGT 102350 | ||||| || || || || | | ||||||||| || ||||| ||||||||| |||| | Sbjct 253237 TTATGGAAAACATCTCTCTAGCGGGTAAGACCAATTTCTTTGAGAAGAGAGTCTCCGATT 253296 Query 102351 ATCAA 102355 | ||| Sbjct 253297 ACCAA 253301 >seq35 Length=1454894 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 94182 TGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTC 94241 |||||||||||||||||| || |||||||| || || |||| ||| | |||||||| Sbjct 638368 TGCGATAGAAGCCAAATTACAAACTGCAGTCTCATCTTTATCAGAGTATTCCACAATTTC 638309 Query 94242 AGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGAT 94301 | || ||||| |||||||| || | |||| || | ||| ||| ||| || || Sbjct 638308 ACAACATAAATTGGAAGACTTAATCACACCGAGGTTCTTTTGATTACTCTTGCTGTTACA 638249 Query 94302 GGTATCCTTAAAGCACACATAAGGTGTTCCAGTTTCGATACGTGC 94346 || |||||| | || ||||||| ||||||||| | |||| Sbjct 638248 GGCATCCTTGTATATCATGAAAGGTGTACCAGTTTCGGTTTGTGC 638204 >seq9 Length=1454246 Score = 86.0 bits (94), Expect = 1e-11 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || |||||||||||||| || || || || || | | |||||||||||| |||||| Sbjct 634633 CCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAAATACCTTCAATG 634574 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGTTCCACA 94910 ||| |||| | ||| |||||| || || | | ||| || |||| || || Sbjct 634573 GAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGTG-GAGTACCTGC 634515 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTC---GACATGAGATCATATGT 94967 ||| || || || || ||||||||| | ||||| |||| ||||| | || || || Sbjct 634514 ATTGAAAAGAGTTGGAGAAGCATGGATGAAATA---CCTCAATGACATCAAATTGTAAGT 634458 Query 94968 TTCAATGACAGATTTGATGTCTGATCCGTGAATGCC 95003 ||| || |||||||||| ||| || ||||| || Sbjct 634457 TTCGATCGCAGATTTGATATCTTCACCATGAATACC 634422 Score = 84.2 bits (92), Expect = 4e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94182 TGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTC 94241 |||||||||||| ||||| || ||||||||||| ||| ||| ||| | || ||||| Sbjct 635243 TGCGATAGAAGCTAAATTACAAACTGCAGTTTCATCCTTGTCAGAGTATTCCACGATTTC 635184 Query 94242 AGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGAT 94301 | || ||||| ||||| || || | || | || | ||||||| |||| ||| Sbjct 635183 ACAACATAAATTGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCTTTTCATTACA 635124 Query 94302 GGTATCCTTAAAGCACACATAAGGTGTTCCAGTTTC 94337 | ||||||| || || ||||||| |||||||| Sbjct 635123 TGCATCCTTATAGAGCATGAAAGGTGTACCAGTTTC 635088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582326366060