Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq51 91.5 1e-13 seq30 86.0 6e-12 >seq51 Length=425556 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 ||||| ||||| | ||||| || |||||||||||||| || | || || || Sbjct 154963 AAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTACCATCC 155022 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || || |||||||| ||| |||| || | |||||| || || || || ||||| ||||| Sbjct 155023 TCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTC- 155081 Query 139673 GTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| | |||| ||| | | || | ||||| | || |||||||| | || | || Sbjct 155082 TTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGT 155141 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || || | ||||| || || ||||||||| Sbjct 155142 TTTACCAGTTAGAGTTTTCACAAAGATTTGCATA 155175 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 ||||| || || | |||||||| |||||||||||||||||| | || || |||| Sbjct 155191 AAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTACCGTCT 155250 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || || || ||||| ||| |||| | | ||| || || ||||| || |||||||| || Sbjct 155251 TCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATC- 155309 Query 139673 GTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| | |||| || | | || | || |||| | || ||||| | ||| | || Sbjct 155310 CTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTAATAGT 155369 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| || || | || || ||||| || |||||| Sbjct 155370 CTTACCAGTTAGAGTCTTAACGAAAATCTGCATA 155403 >seq30 Length=1378366 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 ||||| ||||| | ||||||||||| || ||||| ||||| || || || |||| Sbjct 148335 AAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCT 148394 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || | || ||||| ||| | |||| | || || || ||||| || ||||| ||||| Sbjct 148395 TCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTC- 148453 Query 139673 GTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| |||| | |||| | | || | || || | | ||||| || | || | || Sbjct 148454 CTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGT 148513 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || ||||| ||||| || || ||||||||| Sbjct 148514 TTTACCAGTCAAGGTTTTCACAAAGATTTGCATA 148547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063181494400