Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq30 196 5e-45 seq52 154 1e-32 >seq30 Length=1378366 Score = 196 bits (216), Expect = 5e-45 Identities = 580/885 (66%), Gaps = 11/885 (1%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 || ||||| ||| ||||||||| |||||||| ||||| ||||| | || || || || Sbjct 665188 TTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTACCGGCTAGAGAGATGTTC 665247 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 13700 |||||||| || ||||| ||| | || | ||| ||| ||| || | | || Sbjct 665248 TCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCATTACCAAGAGCCACCAGA 665307 Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760 | ||| ||||||| |||||| | |||||| ||||| | ||||| || | || Sbjct 665308 AGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCGGCGTTCATGCCCAGCAGA 665367 Query 13761 TTTACAGGAATTATATTGGTTAAAAAT-TCTTTT-TCTATAGACACAGCCTCTTTTATAA 13818 || || | || || ||| | ||| || || || || ||||| || | || | Sbjct 665368 GCCACGGGGAGAGCATC--TTCAAAGTATCTCTTCTCAATTGATACAGCTTCAGTAATGA 665425 Query 13819 TAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13878 | || | ||| || | || | || | ||| || | || ||| |||| Sbjct 665426 TTCTTTCCACAATGTCTGGACTTGGTCTGTTCTTCAAATGGGCGAATAATAGACAAGCAA 665485 Query 13879 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13938 |||| || | || || ||||||| || | ||| || || || ||||| ||||||| Sbjct 665486 AATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACCTGGCA 665545 Query 13939 TCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCT 13998 | | || || || |||||||| || ||||||||||| || || ||||| | || | Sbjct 665546 TTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAAACACCTT 665605 Query 13999 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCAT 14057 | ||||| ||||| || | ||||| ||| || | || | | || | || ||||| Sbjct 665606 CCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTGA-ATCCAC 665664 Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117 | | |||||||| | |||| || || || ||||||| |||||||||||| Sbjct 665665 CTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAAATAAA 665724 Query 14118 TATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 14177 |||| | || | ||| | | |||| |||||||| | || ||| ||||||| Sbjct 665725 AATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGTTTCAGAA 665784 Query 14178 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACT 14237 || || |||||||| ||||| || || || ||||| |||| |||| ||| || Sbjct 665785 TGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTATTTGGACC 665844 Query 14238 TCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14296 || | || |||| | || ||||||| |||||||| |||||||| |||||||| || Sbjct 665845 TCAGCAGAGAAAT-TCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGCAAAGAA 665903 Query 14297 TGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGA 14353 || | | || ||| || || || ||||| | | || |||||||| Sbjct 665904 CGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTCCAATCATC 665963 Query 14354 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATA 14413 |||||||| || | ||| | ||| ||| |||||||||| || | ||| | || || Sbjct 665964 CAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTCTCTTGTA 666023 Query 14414 CATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458 | ||| ||||| | |||| || || |||| |||||||| Sbjct 666024 AGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAATCT 666068 >seq52 Length=524665 Score = 154 bits (170), Expect = 1e-32 Identities = 457/693 (66%), Gaps = 14/693 (2%) Strand=Plus/Minus Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655 ||||| || |||||||| || || ||||| | || || || ||||||||||| || ||| Sbjct 253288 ACTCTCTTCTCAAAGAAATTGGTCTTACCCGCTAGAGAGATGTTTTCCATAAAGTCGAAT 253229 Query 13656 GGATTTATTGACATA--AACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAA 13713 |||||| | ||||| | ||||| || ||| || | | ||| | ||| || |||| Sbjct 253228 GGATTTGT-GACATTGTAGTACTTT-TCGTTACCAAGAGCCACTAGAAGTCTGTCGGCAA 253171 Query 13714 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13773 || || | ||||| ||||| | ||||| || | || || || | Sbjct 253170 CGAATTCGACGTATTGGTTCATTAGCGCGGCGTTCATGCCCAGCAGAGCCACGGGGAGAG 253111 Query 13774 TATTGGTTAAAAAT-TCT-TTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAAT 13831 || || ||| | ||| ||||| || || ||||| || | ||||| || | ||| Sbjct 253110 CATC--TTCAAAGTATCTCTTTTCAATTGAAACAGCTTCAGTAATAATCTTTTCCACAAT 253053 Query 13832 CTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 13891 || | || | || | || || | || ||| ||||| || ||| | Sbjct 253052 ATCTGGACTTGGTCTGTGATTCAAGTGAGCGAATAATAGACAGGCAAAGTCGGTATGCAA 252993 Query 13892 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 || || ||||| | ||| | |||||| || || |||| |||||||||| || || Sbjct 252992 ACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCATCAGACCCTTCTT 252933 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 || |||||||| || ||||| || ||||| || ||||| || || |||||||| ||||| Sbjct 252932 CTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTTCAACTGCGGCAAA 252873 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATT 14070 || | ||||| ||| || | |||| || | | || ||||| | | ||||||| Sbjct 252872 TGCGACTAATCTTTCAGCATAAAGGGCTTCTTCATCTTGA-ATCCACCTAATGGCCCATT 252814 Query 14071 CAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTT 14130 | | |||| | | || || ||||||| ||||||||||| | || ||| | Sbjct 252813 CTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATTAAATAAGAAATCAGCCTCCT 252754 Query 14131 T--AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14188 | ||| | | | |||| |||||||| | || ||| |||||||||| |||||||| Sbjct 252753 TGGAGTCCCT--ACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAGTGGATGTTTTC 252696 Query 14189 CATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAA 14248 ||| || || || || || ||||| | ||||| | ||| ||||| | | || Sbjct 252695 CATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAATTTGCACTTCGGCAGAGAA 252636 Query 14249 TCTTTCGGCCAAATTTTCATTAACTATACCATC 14281 | ||| ||||||| ||||| || ||||| || Sbjct 252635 GTTCTCGACCAAATTCTCATTCACAATACCGTC 252603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727208448800