Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq30 187 2e-42 >seq30 Length=1378366 Score = 187 bits (206), Expect = 2e-42 Identities = 578/885 (65%), Gaps = 11/885 (1%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 || ||||| ||| ||||||||| ||||| || ||||| ||||| | || || || || Sbjct 665188 TTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTACCGGCTAGAGAGATGTTC 665247 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 |||||||| |||||||| ||||| || | ||| ||| ||| || | | | Sbjct 665248 TCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCATTACCAAGAGCCACCAGA 665307 Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548 | ||| ||||||| |||||| | |||||| ||||| | ||||| || | || Sbjct 665308 AGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCGGCGTTCATGCCCAGCAGA 665367 Query 13549 TTTACAGGAATTATATTAGTTAAAAAT-TCTTTT-TCTATAGACACAGCCTCGTTTATAA 13606 || || | || || ||| | ||| || || || || ||||| || | || | Sbjct 665368 GCCACGGGGAGAGCATC--TTCAAAGTATCTCTTCTCAATTGATACAGCTTCAGTAATGA 665425 Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666 | | | | |||||| | || | || | ||| || | || ||| |||| Sbjct 665426 TTCTTTCCACAATGTCTGGACTTGGTCTGTTCTTCAAATGGGCGAATAATAGACAAGCAA 665485 Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726 |||| || | || || ||||||| || | ||| || || || ||||| ||||||| Sbjct 665486 AATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACCTGGCA 665545 Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786 | | || || || |||||||| || ||||| |||||||| || ||||| | || | Sbjct 665546 TTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAAACACCTT 665605 Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCAT 13845 | ||||| ||||| || | || || ||| || | || | | || |||| ||||| Sbjct 665606 CCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTGA-ATCCAC 665664 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905 | | |||||||| | |||| || || || |||| |||||||| |||||| Sbjct 665665 CTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAAATAAA 665724 Query 13906 TGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 13965 ||| | || | ||| | | |||| |||||||| | || ||| ||||||| Sbjct 665725 AATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGTTTCAGAA 665784 Query 13966 TGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14025 || || ||||| || ||||| || || || || || |||| || | ||| ||| Sbjct 665785 TGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTATTTGGACC 665844 Query 14026 TCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAA 14084 || | || |||| | || |||| || ||||||||||||||||| |||||||| || Sbjct 665845 TCAGCAGAGAAAT-TCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGCAAAGAA 665903 Query 14085 TGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGC 14141 || | | || ||| || || || ||||| | | || |||||||| | Sbjct 665904 CGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTCCAATCATC 665963 Query 14142 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATA 14201 |||||||| || | ||| | ||| ||| |||||||||| || | ||| | || || Sbjct 665964 CAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTCTCTTGTA 666023 Query 14202 CATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14246 | ||| ||||| | |||| || || |||| |||||||| Sbjct 666024 AGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAATCT 666068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588010328480