Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq30 116 3e-21 seq51 86.0 5e-12 >seq30 Length=1378366 Score = 116 bits (128), Expect = 3e-21 Identities = 160/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||||| ||||| || | ||| ||||| || | ||||||||| || | ||| | Sbjct 149241 AGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTG 149300 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || |||| || || || |||||||||| || |||||| |||| || | |||||| Sbjct 149301 CCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCC 149360 Query 43012 TTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACC 43068 || || |||| | || | ||||| || | | |||||| || |||||| |||| Sbjct 149361 TTGTC-CTGA--ATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAA 149417 Query 43069 GTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || |||||||| || |||||||| || || ||||||||||| Sbjct 149418 GTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 149458 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 ||| || ||||| || | ||| ||||| || | |||||||| |||| || | | Sbjct 148787 TCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACC 148846 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 ||| || |||||||| || |||||||| | || |||||| || | || | |||||| || Sbjct 148847 GTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTT 148906 Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073 || |||| ||||| || | | || || || || || || | || || Sbjct 148907 GTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGAT 148966 Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||| || ||||||||||| || || ||||||||||| Sbjct 148967 AGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 149002 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 |||||||| ||||| || | ||| ||| || || | |||||||| |||| || | Sbjct 148329 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 148388 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 |||| |||||||| || || ||||||||||||| |||||| || | || | |||||| Sbjct 148389 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 148448 Query 43012 TTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070 || || ||| || ||| || | | | || || || || || || | || Sbjct 148449 TTGTC-CTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGT 148507 Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || ||||| || || | ||||||||||| |||||||| Sbjct 148508 GATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 148546 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||||| ||||| || | ||| ||||| || | |||||||| || || || | Sbjct 149013 AGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTG 149072 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || || | ||| || || ||||||||||||| |||||| || | || | |||||| Sbjct 149073 CCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCT 149132 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || |||| |||||| || | | || || || || || || | || Sbjct 149133 TTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAAGTG 149192 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || ||||||||||| || || ||||| ||||| Sbjct 149193 ATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 149230 >seq51 Length=425556 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||||| ||||| || | ||| |||||||| | |||||||||||| Sbjct 52919 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGAC 52860 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||| || || ||||| ||||||| ||||| || | || Sbjct 52859 AACGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 52800 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTCG 43059 | |||||| || || |||| | || | ||||| || ||| ||||| | ||| Sbjct 52799 ATACCTTCCTTGTC-CTGA--ATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCG 52743 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAA 43101 || |||| || || || || || || | ||| || |||||| Sbjct 52742 ACCTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 52701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381368986471656