Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq30 136 6e-27 seq52 118 2e-21 >seq30 Length=1378366 Score = 136 bits (150), Expect = 6e-27 Identities = 386/592 (65%), Gaps = 6/592 (1%) Strand=Plus/Minus Query 124984 GTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTC 125043 |||||||| || || ||||| | |||||||| |||||| || ||||| | || Sbjct 666070 GTAGATTTGTTCTTTTCCCCATTAAATATCATGAAATTTGGCAAGCTTACAAGAGAGCAG 666011 Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103 | || || |||||||| | ||||| ||||| | || ||||| || | |||||| | | Sbjct 666010 AAGCATCATTTTGGACAGCTGAAGAAATCGATTTATCGAAGGATTTGGATGATTGGAATA 665951 Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCT 125163 | ||| |||| ||| || | || || || | | || |||||||| | | Sbjct 665950 ATAAGATGAGTGAAGGTGAAAGATATTTCATTTCAAGAGTCCTAGCGTTCTTTGCAGCAT 665891 Query 125164 CCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAG 125223 ||||||| || || || || ||| || || |||||| ||| | || || | Sbjct 665890 CCGATGGTATTGTTAATGAGAATTTGGTGGAGAATTTCTCTGCTGAGGTCCAAATACCGG 665831 Query 125224 AGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACT 125283 ||| |||||| ||||| ||||| || ||||| || || | || || |||| || | Sbjct 665830 AGGCTAAGTGCTTCTACGGGTTCCAGATTATGATGGAAAATATCCATTCTGAAACTTATT 665771 Query 125284 CTACACTGATTGACATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACG 125340 | | ||||||| | |||| | | ||| | | || || || | | ||||| | Sbjct 665770 CGCTATTGATTGATACCTACAGTAGAGATACCGAGGAAAGTGAAT---TTTTATTTAATG 665714 Query 125341 CAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATG 125400 |||| || | | || | || ||||||| |||||| ||| ||||||| | | Sbjct 665713 CAATTGAAAACATTCCACCAATCAAGGAAAAGGCAGAATGGGCAATTAGGTGGATTCAAG 665654 Query 125401 ACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCT 125460 |||| | | || || || ||| | ||||| || ||||| || || || | |||| Sbjct 665653 ACGATACTGCCCTTTATGCTGAAAGATTAGTGGCCTTTGCCGCAGTGGAAGGTGTTTTCT 665594 Query 125461 TTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGA 125520 | ||||| ||||| |||||||||||| | |||||| || || ||||| || | | Sbjct 665593 TCTCGGGATCATTTGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTAATGCCAGGTTTAA 665534 Query 125521 CGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 | | ||| || || || | | ||||||| || | ||| || ||||| Sbjct 665533 CTTTCTCTAATGAATTGATCTGTAGAGACGAAGGTTTGCACACAGATTTTGC 665482 >seq52 Length=524665 Score = 118 bits (130), Expect = 2e-21 Identities = 241/352 (68%), Gaps = 6/352 (2%) Strand=Plus/Plus Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290 |||||| ||||| |||||||||||||| || ||| | ||||| |||| ||||||| | Sbjct 252668 GTGCTTCTACGGGTTCCAAATCATGATGGAAAACATCCACTCTGAAACGTACTCTTTGTT 252727 Query 125291 GATTGACATGTACATTCGCGATCCGCAACGTAAACACATGC--TCTTTAACGCAATCGAC 125348 |||||| | |||| | | || | ||| | | | || | ||||| || || || Sbjct 252728 GATTGATACCTACAGTAGGGACTC-CAAGG-AGGCTGATTTCTTATTTAATGCCATTGAA 252785 Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGAC-AA 125407 | | || | || | ||||||| |||||| ||| ||||||| | || || || Sbjct 252786 AACATCCCACCAATCAGAGAAAAGGCAGAATGGGCCATTAGGTGGATTCAAGATGAAGAA 252845 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | | | || || || ||| | || ||||| ||||| || || || |||||||| || || Sbjct 252846 GCCCTT-TATGCTGAAAGATTAGTCGCATTTGCCGCAGTTGAAGGTATCTTCTTCTCAGG 252904 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 ||| || |||||||||||| | |||||| || || ||||| || || || | Sbjct 252905 GTCTTTCGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTGATGCCAGGTCTAACCTTCTC 252964 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTA 125579 |||||| || || | ||||||| || | || ||||||||| |||| Sbjct 252965 TAACGAATTGATTTGCAGAGACGAAGGTTTGCATACCGACTTTGCCTGTCTA 253016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057977252320