Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq30 170 2e-37 seq52 125 6e-24 >seq30 Length=1378366 Score = 170 bits (188), Expect = 2e-37 Identities = 597/916 (65%), Gaps = 37/916 (4%) Strand=Plus/Plus Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901 |||||||| ||| || ||||| || ||||||||| ||||| || || || || Sbjct 665170 TTTGACATGACACCAGCCTTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTA 665229 Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTA 12961 || ||| || || || |||||||| ||||| || ||| || ||||||||| | | Sbjct 665230 CCGGCTAGAGAGATGTTCTCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCA 665289 Query 12962 CACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCA 13021 || | | | | | |||||||||||||||||| | ||| || ||||||| | Sbjct 665290 TTACCAAGAGCCACCAGAAGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCG 665349 Query 13022 CAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCA 13081 |||||| || | | || || | ||| ||| || | | || || || Sbjct 665350 GCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCTTCAAAGTATCTCTTCTCAATTGAT 665409 Query 13082 ACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTA 13141 || ||||| ||| || |||| || | ||| ||| ||| | | ||| Sbjct 665410 ACAGCTTCAGTAATGAT---TCTTTCCACAATGTCT------GGACTTGGTCTGTTCTTC 665460 Query 13142 AAC-------ATCATA--CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 || || ||| || |||||||| |||||| ||||| ||||||| || | Sbjct 665461 AAATGGGCGAATAATAGACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAAT 665520 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAG-CCCTCGTTTTTTAATCCAAAATATAGCAGC 13251 || || || || |||| ||| ||||| || |||| || || || |||||| || ||||| Sbjct 665521 TCATTAGAGAAAGTTAAACCTGGCATTAGACCCTTCTTCTTCAA-CCAAAAGATGGCAGC 665579 Query 13252 AAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATA 13311 ||| || ||||| || || | ||||| ||||| ||||| || | || |||||| |||| Sbjct 665580 AAATGATCCCGAGAAGAAAACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATA 665639 Query 13312 C---GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCA 13368 | | ||| | || | |||||| | | ||||| | ||| |||| || | Sbjct 665640 AAGGGCAGTATCGT--CT-TGAATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGG 665696 Query 13369 GTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428 || ||||| ||||| ||||||||| | | |||||| | ||| | | || || Sbjct 665697 TGGAATGTTTTCAATTGCATTAAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGT 665756 Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488 ||| ||||||| ||| |||| ||||| |||||||||||| || ||||| || || Sbjct 665757 ATCAATCAATAGCGAATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTA 665816 Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGT 13547 || || ||||||| | || || || || | || |||| | || | || || || | Sbjct 665817 GAAGCACTTAGCCTCCGGTATTTGGACCTCAGCAGAGAAAT-TCTCCACCAAATTCTCAT 665875 Query 13548 TAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTT--AATAAAttttttttC 13605 |||| || || || || ||||| || || || | ||| ||| || | | |||| Sbjct 665876 TAACAATACCATCGGATGCTGCAAAGAACGCTAGGA--CTCTTGAAATGAAATATCTTTC 665933 Query 13606 GTTTTCTGACAACT--TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAAC 13662 ||| || || ||| |||||| ||||| || |||||||| | || ||| | Sbjct 665934 ACCTTCACTCATCTTATTATTCCAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGC 665993 Query 13663 GGTCCAAAAAGAAGCAACAGCCTTCTTATACATCAT-CCATATATCCTTATAAACAATGG 13721 |||||||| || || | || |||| || | | | ||| || || | ||| ||||| Sbjct 665994 TGTCCAAAATGATGCTTCTGCTCTCTTGTA-AGCTTGCCAAATTTCATGATATTTAATGG 666052 Query 13722 GAAACACAACGTATCT 13737 | || | ||| |||| Sbjct 666053 GGAAAAGAACAAATCT 666068 >seq52 Length=524665 Score = 125 bits (138), Expect = 6e-24 Identities = 481/746 (64%), Gaps = 12/746 (2%) Strand=Plus/Minus Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901 |||||||| ||| ||||| || ||| ||||| || ||||| || || || || Sbjct 253321 TTTGACATGACACCAGCCTTTTGGTAATCGGAGACTCTCTTCTCAAAGAAATTGGTCTTA 253262 Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTA 12961 || ||| || || ||||||||||| ||||| |||||| | | ||||| |||| Sbjct 253261 CCCGCTAGAGAGATGTTTTCCATAAAGTCGAATGGATTTGTGACATTGTAGTACTTTTCG 253202 Query 12962 CACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCA 13021 || | | | || | |||||| ||||| || || | ||| || ||||||| | Sbjct 253201 TTACCAAGAGCCACTAGAAGTCTGTCGGCAACGAATTCGACGTATTGGTTCATTAGCGCG 253142 Query 13022 CAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCA 13081 |||||| || | | || || | ||| ||| || | | ||||| || | Sbjct 253141 GCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCTTCAAAGTATCTCTTTTCAATTGAA 253082 Query 13082 ACTGCTTCGATAACTATGTCT--CTTATTACGTTCTCTAATGGAGGATTTGATAGA--TG 13137 || ||||| ||| || | | | | || ||| | | | | | |||| | || Sbjct 253081 ACAGCTTCAGTAATAATCTTTTCCACAATA---TCTGGACTTG-GTCTGTGATTCAAGTG 253026 Query 13138 CTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTT 13197 || | | ||| ||||| || ||||| ||||| ||||| | || | ||||| Sbjct 253025 AGCGAATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTT 252966 Query 13198 TGAAAATGTTAGACCCGGCATAAG-CCCTCGTTTTTTAATCCAAAATATAGCAGCAAACG 13256 || || |||||||| ||||| || |||| || || || |||||| || ||||| || | Sbjct 252965 AGAGAAGGTTAGACCTGGCATCAGACCCTTCTTCTTCAA-CCAAAAGATGGCAGCGAAAG 252907 Query 13257 AACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCAT-ACGTA 13315 | || || || || || ||||||||||| ||||| || | || |||||| ||| | | Sbjct 252906 ACCCTGAGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGG 252847 Query 13316 CTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATA 13375 || | || | | |||||| | ||||||| | ||| |||| | | | || Sbjct 252846 CT-TCTTCATCTTGAATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATG 252788 Query 13376 TTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATC 13435 ||||| || || |||||||| ||| ||||| ||| | | || ||||| ||| Sbjct 252787 TTTTCAATGGCATTAAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATC 252728 Query 13436 AATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACAT 13495 || || ||| |||| || || || ||||||||| |||||||| || || || || Sbjct 252727 AACAAAGAGTACGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCAC 252668 Query 13496 CTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATC 13555 | || || | | || ||||||| | || | || | || || || || || || Sbjct 252667 TTGGCTTCAGGAATTTGCACTTCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATA 252608 Query 13556 CCGTCACTAGCAGCaaaaaaaGCAAG 13581 ||||| ||||| || || || || Sbjct 252607 CCGTCGGATGCAGCGAAGAACGCTAG 252582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981706657064