Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq51 89.7 4e-13 seq30 82.4 6e-11 >seq51 Length=425556 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT-- 48569 ||||| || ||||| || || ||||||||||||||| ||||| | || ||| || Sbjct 155188 CTTAAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAA-AGTC-CTAC 155245 Query 48570 CGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCT 48629 |||| ||||| ||||||||| | | ||||| | || || || || | || ||| | Sbjct 155246 CGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTT 155305 Query 48630 TGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTA 48689 | ||| ||| || ||||| | |||||||||| ||| || ||| | || | Sbjct 155306 TATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTAA 155365 Query 48690 TGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || ||||| || ||||| || || ||||||||||| Sbjct 155366 TAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT 155402 >seq30 Length=1378366 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 ||||| || || || || || ||| || || ||||||||||||| || || || Sbjct 148332 CTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCG 148391 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || |||| |||||||| | |||| || | ||| || || || | || ||||||| Sbjct 148392 TCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTG 148451 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| |||||| || | | | || ||||| | ||| ||| || | || ||| Sbjct 148452 TCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATG 148511 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || | ||||||||||| || ||||| Sbjct 148512 GTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 148546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250522312132