Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq52 107 2e-18 seq37 96.9 4e-15 seq14 87.8 2e-12 >seq52 Length=524665 Score = 107 bits (118), Expect = 2e-18 Identities = 310/471 (66%), Gaps = 27/471 (6%) Strand=Plus/Minus Query 164526 TTTATTAC---ATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATTGCTCA 164582 |||||||| |||| ||||| ||| |||||| || || || ||| || |||| | | Sbjct 112796 TTTATTACTTTATGGTCCTCCAGGTACCGGTAAGACTTTGATCGCTAGAAAAATTGGT-A 112738 Query 164583 AGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAACAAAT 164638 || | |||||| || || || ||| ||||| |||||||| ||| | || | |||| Sbjct 112737 AGATGTTAAAT-GCAAAGGAACC--TAAGATTGTGAATGGTCCAGAAATTTTAAGTAAAT 112681 Query 164639 ATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAA 164698 | || || || |||| ||| || | || | || |||| || |||| ||| | | Sbjct 112680 ACGTGGGGTCCTCGGAAGAAAATATTCGTAACCTTTTCAAGGATGCAGAAGCCGAATATA 112621 Query 164699 AGA--AAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGATGCTCT 164756 | ||| ||| || | ||| ||| | ||| | |||||||| | ||| || | Sbjct 112620 GGTCTAAG--GGTGAAGATTCCTCATTGCATATCATTATCTTTGATGAATTGGATTCTGT 112563 Query 164757 TTGCAAAAAACGTGGT------GATAATATTA------TTCATGATGCAGTGGTTAATCA 164804 || || || | ||| | | || || || ||| || || ||||| Sbjct 112562 TTTTAAGCAAAGAGGTTCGAGAGGTGATGGTACAGGCGTTGGTGACAATGTTGTCAATCA 112503 Query 164805 GTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTATGAC 164864 ||||| | || || |||||||| || || ||||| ||| || || | |||||||| Sbjct 112502 ATTGCTAGCCAAGATGGATGGTGTTGATCAATTGAATAACATTCTAGTTATCGGTATGAC 112443 Query 164865 CAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAAAAT 164924 |||||| |||||||||||| ||||||||||||| || ||| |||| || | || | Sbjct 112442 CAACCGTAGAGATTTAATTGATAATGCTTTATTACGTCCAGGTAGATTCGAGGTCCAAGT 112383 Query 164925 AGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975 ||||| ||||| || || | || | | ||||||||| | |||| Sbjct 112382 GGAAATTCACTTACCAGATGAACAGGGTAGATTGCAAATTTTAGATATTCA 112332 >seq37 Length=1474404 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 19343 AGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGC 19402 ||| || | ||||| || | || |||||||||||||| ||| | || |||||| || Sbjct 958726 AGAACTACCAAAATTCCACAGATCGGTGATAAGTTTGCATCTCGTCATGGTCAAAAGGGT 958667 Query 19403 ACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCG 19462 || ||||| | ||| || |||||||||||| |||||| || ||||| || || Sbjct 958666 ACCATCGGTATTACTTACGGTAGAGAAGATATGCCATTTACTGCCGAAGGTATTGTACCT 958607 Query 19463 GATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 ||| | || |||||||| ||||| ||||| ||| ||||| Sbjct 958606 GATTTGATCATTAACCCTCATGCCATTCCATCTCGTATGAC 958566 >seq14 Length=1452442 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 19343 AGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGC 19402 ||| || | || || || |||| |||||||| ||||| ||| | | |||||| || Sbjct 940369 AGAACTACCAAGATCCCACAAATCGGTGATAAATTTGCATCTCGTCACGGTCAAAAGGGT 940310 Query 19403 ACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCG 19462 || |||||| | ||| || |||||||||||| |||||| || ||||| || || Sbjct 940309 ACCATTGGTATTACCTATGGTAGAGAAGATATGCCATTTACTGCTGAAGGTATTGTACCT 940250 Query 19463 GATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 ||| | || || ||||| ||||| ||||| ||| ||||| Sbjct 940249 GATTTGATCATCAACCCTCATGCCATTCCATCTCGTATGAC 940209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871016811200