Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01-
05] 132 sequences; 19,269,454 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq30 143 3e-29
seq52 125 8e-24
>seq30
Length=1378366
Score = 143 bits (158), Expect = 3e-29
Identities = 350/532 (66%), Gaps = 17/532 (3%)
Strand=Plus/Plus
Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534
||| |||||||| ||||||||||| || |||| || ||||||||||| || |||||
Sbjct 665478 ACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAA 665537
Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594
||| ||||||| || |||| || |||||||| || | ||||||| ||| || |||||
Sbjct 665538 ACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAA 665597
Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTA------TGTAGATTCTTT 21648
|| || || || || ||||| || ||||||| |||| | || ||| ||||
Sbjct 665598 AACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTG 665657
Query 21649 ATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAAT 21708
| ||||| | |||||||| ||||||||| || || ||| | |||||
Sbjct 665658 A------ATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAAT 665711
Query 21709 AGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACT 21768
|| || || | | | |||| || ||| | ||
Sbjct 665712 TGCATTAAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGA 665771
Query 21769 ATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC 21828
||| |||||||||| |||||||| ||| ||||| || ||||| || || | |||||
Sbjct 665772 ATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTC 665831
Query 21829 TGAACATTGAACCTCGGAATA-AAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCAC 21887
| ||| ||||| | | | |||| | | |||| || ||||| || || |||||
Sbjct 665832 CGGTATTTGGACCTCAGCAGAGAAATTCTCCA-CCAAATTCTCATTAACAATACCATCGG 665890
Query 21888 TGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTT--CGTTATCTGTTAAT-T 21944
|| ||||| || || | | || || ||||||| || | || || | | |
Sbjct 665891 ATGCTGCAAAGAACGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTAT 665950
Query 21945 TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996
| |||||||| ||||| || |||||||| | |||||||| |||||||||
Sbjct 665951 TATTCCAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAA 666002
>seq52
Length=524665
Score = 125 bits (138), Expect = 8e-24
Identities = 346/524 (66%), Gaps = 10/524 (2%)
Strand=Plus/Minus
Query 21167 TTTGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTT 21226
|||||||| | || ||||| ||||| ||||| || || || ||||| |||||
Sbjct 253321 TTTGACATGACACCAGCCTTTTGGTAATCGGAGACTCTCTTCTCAAAGAAATTGGTCTTA 253262
Query 21227 CCTTCCAATGATATAGATTCCATAAAATCAAATGGATTT-TCAGATTTAAATATTTTATT 21285
|| | | || || ||||||||| || ||||||||| | | ||| | || ||| |
Sbjct 253261 CCCGCTAGAGAGATGTTTTCCATAAAGTCGAATGGATTTGTGACATTGTAGTACTTT-TC 253203
Query 21286 ACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTC 21345
||| || | || | ||| || || || ||||| | ||||| ||||| |
Sbjct 253202 GTTACCAAGAGCCACTAGAAGTCTGTCGGCAACGAATTCGACGTATTGGTTCATTAGCGC 253143
Query 21346 ACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGAT-TTTTCTATAG 21404
||||| || | || || || ||||| | | ||||| | | ||||| || |
Sbjct 253142 GGCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCT-TCAAAGTATCTCTTTTCAATTG 253084
Query 21405 AGACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGG---GGGATACAATAATT 21461
| || |||||| ||| || ||| | || || ||| || | ||| ||| |
Sbjct 253083 AAACAGCTTCAGTAATAATCTTTTCCACAATATCTGGACTTGGTCTGTGATTCAAG---T 253027
Query 21462 GTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCAT 21521
| || | | ||| ||||| || |||||||||||| || || | || ||||| |
Sbjct 253026 GAGCGAATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGT 252967
Query 21522 TAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATG 21581
|||| || |||| ||| ||||| | || |||| || |||||||| || | || || |
Sbjct 252966 TAGAGAAGGTTAGACCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAG 252907
Query 21582 CTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG 21641
||||| ||||| || || ||||| || |||||||| ||||||| |||| | || |
Sbjct 252906 ACCCTGAGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGG 252847
Query 21642 ATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCT 21685
||||| ||| ||||| | ||||||| ||||||||||
Sbjct 252846 CTTCTTCATCTTGAATCCACCTAATGGCCCATTCTGCCTTTTCT 252803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531899922363680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |