Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq30 158 1e-33 seq35 132 4e-26 seq9 132 4e-26 seq51 129 5e-25 >seq30 Length=1378366 Score = 158 bits (174), Expect = 1e-33 Identities = 175/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || ||||| |||||| ||||||| | |||||||| || ||| Sbjct 148546 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 148487 Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || |||||||| | | | || | |||| ||| ||||| ||||| ||||| ||||||| Sbjct 148486 GATACTATCGA-TAATGTTAAATCTAAAATTCAG-GACAAGGAAGGTATTCCTCCTGACC 148429 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| | | |||||||| || || ||||| ||||| | | | ||| || ||||||| Sbjct 148428 AACAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACA 148369 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 | || || ||||| || || || || || || |||| |||||||| ||| Sbjct 148368 ACATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGGA 148319 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | |||||||| | ||||| | |||||||| || ||| Sbjct 149002 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 148943 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| || ||| ||||| ||||| ||||| || |||||| Sbjct 148942 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 148883 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | |||||||| || |||||||||||||| | | | ||| || |||||||| Sbjct 148882 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 148823 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || ||||| || || || || || | || ||||||| || Sbjct 148822 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGG 148776 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || |||||| | ||||| | ||||| ||||| || Sbjct 149458 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 149399 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| |||| | ||| ||||| ||||| |||||||| ||||| Sbjct 149398 GACACCATCGACAACGTCAAGTCAAAGATTCAG-GACAAGGAAGGTATTCCACCCGACCA 149340 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | |||||||| || || || | ||||||| | || | |||||||| Sbjct 149339 ACAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAA 149280 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || ||||| || || || || || ||||| |||||||| || Sbjct 149279 TATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGG 149232 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | |||||||| ||||||| | |||||||| || ||| Sbjct 149230 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 149171 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || |||||||| |||| || | || | || ||||||||||| ||||| || || Sbjct 149170 GATACTATCGACAACGTCA---AATCTAAGATCCAG-GACAAAGAAGGCATTCCTCCAGA 149115 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| | | |||||||| || || ||| | || |||| | ||| | ||||| Sbjct 149114 CCAACAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTA 149055 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || || ||||| || || || || || ||||| |||||||| || Sbjct 149054 CAACATCCAGAAGGAATCTACTCTTCACTTGGTTCTAAGACTAAGAGGTGG 149004 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||||||||| ||||| ||||||| | || || || || |||||||| || Sbjct 39310 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCATT 39369 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || | ||| |||| | ||| ||||| ||||| || |||||||||||||| | | Sbjct 39370 GACAACGTCAAGTCAAAGATTCA-GGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 39428 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || || || || ||||| ||||||| | | || || || ||||| || ||||| Sbjct 39429 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 39488 Query 25187 AGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || | || || || ||||| | ||||| || Sbjct 39489 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGG 39527 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| ||||| | || || | || || || || ||| Sbjct 149686 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 149627 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||| | | ||| ||| ||| ||||| ||||| ||||| || |||||| Sbjct 149626 GATACCATCAACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGACCAA 149567 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | |||||||| || || ||| | ||||| | | | ||| || |||||||| Sbjct 149566 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 149507 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || || || || | || ||||||| || Sbjct 149506 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGG 149460 >seq35 Length=1454894 Score = 132 bits (146), Expect = 4e-26 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| ||||| |||| || | ||||| || || ||| Sbjct 309128 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTCT 309187 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || ||| | || | ||| ||||| || || || ||||||||| Sbjct 309188 GACACTATTGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAGGGTATCCCACCTGAC 309244 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||| ||||||| | | || || ||| ||| Sbjct 309245 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 309304 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| |||||||| | || || || ||||| | ||||| || Sbjct 309305 AACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGG 309354 >seq9 Length=1454246 Score = 132 bits (146), Expect = 4e-26 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| ||||| |||| || | || || || || ||| Sbjct 306884 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 306943 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| ||||| || ||||||||| Sbjct 306944 GACACTATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAAGGTATCCCACCTGAC 307000 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||| ||||||| | | || || ||| ||| Sbjct 307001 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 307060 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| |||||||| | || || || || || | ||||| || Sbjct 307061 AACATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGG 307110 >seq51 Length=425556 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||| | || |||||| | ||||| | || ||||| || ||| Sbjct 155174 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 155115 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| |||| | ||| ||||| ||||| |||||||||||||| Sbjct 155114 GACACCATCGACAACGTTAAGTCAAAGATTCAA-GACAAGGAAGGTATTCCACCTGACCA 155056 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | || ||||| || |||||| |||| |||| | | || | || || || Sbjct 155055 GCAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGAACCTTATCTGACTATAA 154996 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| || |||| || || |||| |||||||| || Sbjct 154995 CATTCAAAAGGAATCTACCTTACACTTGGTTTTAAGACTAAGAGGTGG 154948 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||||||||| ||||| ||||||| | || || || || |||||||| || Sbjct 52702 TTTGTCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCATT 52761 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || | ||| |||| | ||| ||||| ||||| || |||||||||||||| | | Sbjct 52762 GACAACGTCAAGTCAAAGATTCA-GGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 52820 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || ||||| || || ||||| ||||||| | | || || ||||||||| || ||||| Sbjct 52821 GATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCCGATTACAACATCCAAAA 52880 Query 25187 AGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || | || || || ||||| | ||||| || Sbjct 52881 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGG 52919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327302883580