Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq30 233 2e-56 seq52 196 5e-45 >seq30 Length=1378366 Score = 233 bits (258), Expect = 2e-56 Identities = 409/590 (69%), Gaps = 9/590 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| || || || ||||||||||||| | ||||| ||||| ||| |||||| Sbjct 665479 CAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAA 665538 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | || || ||||| | |||||| || | |||||| || || || || Sbjct 665539 CCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAA 665598 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 | ||||||||| || ||||| ||||| | | ||| ||| || || | || | || Sbjct 665599 ACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCG-TCTTG 665657 Query 93272 A-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 | |||| | | ||||| || || |||| ||| || || | |||| || || || Sbjct 665658 AATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATT 665717 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 ||||| | || | || || | ||||| |||| ||||| || || || ||||| | Sbjct 665718 AAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGT 665777 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 ||||||||||| ||| ||||| ||| ||||| |||||||| || |||| |||| || Sbjct 665778 TTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTAT 665837 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 || || || ||| || |||| || | ||| ||||| || ||||||||||||||||| Sbjct 665838 TTGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGC 665897 Query 93511 aaaaaaaGCCAATATATGCTT--TATAAAATGTTTCTCATCATCTTTAAGC---TTATCC 93565 ||| || || | | ||| || |||| | | ||| | || | | | |||| | Sbjct 665898 AAAGAACGCTA--GGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTC 665955 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 ||||| | ||| || || | ||||| |||||| | |||||||| |||||||||||| Sbjct 665956 CAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCT 666015 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 | ||||| | ||| || || ||||||| ||| || || | ||||| Sbjct 666016 CTCTTGTAAGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAA 666065 >seq52 Length=524665 Score = 196 bits (216), Expect = 5e-45 Identities = 405/592 (68%), Gaps = 13/592 (2%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || |||||||||||||| ||||||||||||| | ||||| || || ||| |||| | Sbjct 253012 CAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGA 252953 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | ||| || ||||| | |||||| || | ||| ||| || || || || Sbjct 252952 CCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAG 252893 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 |||||||| || || |||||||| || | | ||| ||| || || || | || Sbjct 252892 ATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGGC-TTCTTCATCTTG 252834 Query 93272 -ATCCATTTTAAAGCCCAATC-GGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 ||||| | | ||||| || | ||||| ||| | | || || |||| || || | Sbjct 252833 AATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATGT-TTTCAATGGCAT 252775 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 |||||| | |||| ||| | || || | |||| ||||| || |||| ||| ||| Sbjct 252774 TAAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTACG 252715 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 ||||||| |||| || ||||| |||||||| |||||||| || | ||||| | | Sbjct 252714 TTTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAA 252655 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 | |||||||| ||| || |||| || | ||| ||||| || ||||| |||||||| | Sbjct 252654 TTTGCACTTCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATACCGTCGGATGCAG 252595 Query 93510 CaaaaaaaGCCAATATATGCTT--TATAAAATGTTTCTCATCATCTTTAAGC---TTATC 93564 | || || || | | ||| || ||| | | ||| | || || | | || | Sbjct 252594 CGAAGAACGCTA--GAACTCTTGAAATGAAAAATCTTTCACCCTCGTTCATCTTGTTGTT 252537 Query 93565 CCAATCGGATAGAT-CTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| || | || || || || ||||| |||||| | ||||| || |||||||||| Sbjct 252536 CCAGTCATCCAAATCCTGCTGCAA-ATCGATTTCTTCTGCTGTCCAGAATGATGCTTCTG 252478 Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 || | ||||| | ||| || || || |||||||| || || | ||||| Sbjct 252477 CTCTCTTGTAGGCTTGCCAGATTTCGTGGTATTGAATAGGGAAAAGAACAAA 252426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859881179680