Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq51 123 2e-23 seq30 95.1 1e-14 seq9 84.2 2e-11 >seq51 Length=425556 Score = 123 bits (136), Expect = 2e-23 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| || |||| | | || |||||||||||||| ||||| | || | ||| Sbjct 154963 AAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTACCATCC 155022 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||||||||| | | ||||||| | || ||||| || || |||||||| ||||| Sbjct 155023 TCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTC- 155081 Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | |||| |||| ||| || | |||||| | || |||||||| | || | | Sbjct 155082 TTGAATCTTTGACTTAACGTTG-TCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAG 155140 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||||| |||||||| ||||| || ||||| Sbjct 155141 TTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 155174 Score = 120 bits (132), Expect = 3e-22 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| ||||| | | ||||||||||||||||| || ||| | ||| | ||| Sbjct 155191 AAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTACCGTCT 155250 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||| ||||||| | |||||| | |||||||| ||||| ||||||||||| || Sbjct 155251 TCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATC- 155309 Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | |||| || | ||| || | ||| |||| || || ||||| | || | | Sbjct 155310 CTGAATCTTTGACTTGACGTTG-TCAATGGTATCGGAAGATTCAACCTCCAAGGTAATAG 155368 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||||||| ||||| || || ||||||||||| Sbjct 155369 TCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT 155402 >seq30 Length=1378366 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479 || ||||| || |||||||| || || || | || | ||||| ||||| ||||| | Sbjct 148581 GATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCA-TCCTCAAGTTGCTTACCAGC 148639 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 | ||||||| | |||||||| ||||| ||||| || || || ||| | |||| || | Sbjct 148640 AAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCC-TGAATCTTTGACTTGA 148698 Query 138540 --TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| | | |||||||| ||||| || || | || | ||||||||||| ||||| Sbjct 148699 CGTTGT-CGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTC 148757 Query 138598 TTTACAAAAATCTGCAT 138614 || || || || ||||| Sbjct 148758 TTGACGAAGATTTGCAT 148774 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || || || | | || ||||| || |||||||| || | Sbjct 149460 CCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 149519 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || ||||| || || | | | || | | ||||||||||||||| Sbjct 149520 AAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGAGGA 149579 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| || | |||| |||| ||||| | ||| || | || || | Sbjct 149580 ATACCTTCGTTGTC-TTGGATCTTTGACTTAACGTTGTT-GATGGTATCAGAAGATTCAA 149637 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || |||||||||| ||| || || ||||||||||| Sbjct 149638 CCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 149686 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| || || | | ||||| || || |||||||| || || ||| | ||| Sbjct 148335 AAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCT 148394 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||| ||||| | | | || | | ||||||||| ||||| |||||||| ||||| Sbjct 148395 TCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCC 148454 Query 138523 GTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||| | ||||| | || | || || | || ||||| || | || | || Sbjct 148455 -TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGT 148513 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||||| ||||| ||||| || ||||| Sbjct 148514 TTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 148546 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || || || | | || ||||| ||||||||||| || | Sbjct 148776 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 148835 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||||||||| | | | ||||| | ||||||||| || || Sbjct 148836 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 148895 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| ||| || || | | || | ||| || | || ||||| Sbjct 148896 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 148955 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || ||||| || || ||||| ||||| Sbjct 148956 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 149002 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/157 (73%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || || || ||||| | | | || || | ||||||||| || || |||||||| ||| Sbjct 149304 TCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCCTTG 149363 Query 138520 TCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 || ||| | |||| || | |||| | | |||||||| ||||| || || | || | Sbjct 149364 TCC-TGAATCTTTGACTTGACGTTGT-CGATGGTGTCGGAAGACTCGACTTCTAAAGTGA 149421 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||||| ||||| || || ||||| ||||| Sbjct 149422 TAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 149458 >seq9 Length=1454246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | | || || || | | | || |||||||| |||||||||||| | Sbjct 307110 CCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 307051 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || | ||| ||||| | | |||| | | |||||||| || || Sbjct 307050 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 306991 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || | || |||| || | ||||| | || || | Sbjct 306990 ATACCTTCCTTGTC-CTGAATCTTGGACTTGACATTG-TCGATAGTGTCAGAAGATTCAA 306933 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || ||||| |||| ||| || |||||||||||||| Sbjct 306932 CCTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 306884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261581167040