Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq16 114 2e-20 seq40 82.4 9e-11 >seq16 Length=789262 Score = 114 bits (126), Expect = 2e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || ||| | || || || |||||||| ||| ||||| || | |||| || | ||| Sbjct 623032 ATTGGTAAGGGTTATTACGGAACCATTTTACCGCCAGTGATTATGAGAAATGTCTTAGAG 623091 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 | ||| ||||| || || |||||||| |||||| | || ||||||||||| |||||| Sbjct 623092 AGTCCCGAATGGTATACTTCATACACTCCATATCAACCAGAAATATCTCAGGGCAGATTG 623151 Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061 || || | || |||| ||||| | |||| || | || || |||| || | || Sbjct 623152 GAGTCTCTGTTAAATTTTCAAACAGTTATCAGTGATTTGACTGGTTTACCTGTATCCAAT 623211 Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAATT 158119 ||||| |||||||||||| ||||| || || || || ||| | | | ||||||| Sbjct 623212 GCATCATTATTAGATGAAGGTACTGCTGCCGCGGAGGCCATGTTACTTTCGTATAATT 623269 >seq40 Length=278800 Score = 82.4 bits (90), Expect = 9e-11 Identities = 161/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || ||| | || || || ||||| || ||| || || || | |||| || || ||| Sbjct 112999 ATTGGTAAGGGTTATTACGGAACTATTTTACCGCCGGTGATCATGAGAAATGTGCTAGAG 113058 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 | || |||||||| ||||| || || ||||| | || ||||||||||| || || Sbjct 113059 AGCCCCGAATGGTACACTTCTTATACCCCATATCAGCCGGAAATATCTCAGGGTAGGCTG 113118 Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061 || | ||||| |||| || || | || || || || || | || || | || Sbjct 113119 GAGTCCTTATTAAATTTTCAGACAGTTATTTGTGATCTTACCGGTTTGCCTGTATCCAAT 113178 Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAATT 158119 ||||| || ||||||| | || || || ||||| || |||||| | | ||||||| Sbjct 113179 GCATCGTTACTAGATGAGGGTACCGCTGCCGCAGAGGCGATGCTGCTTTCGTATAATT 113236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050229715520