Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq30 136 3e-27 seq35 122 7e-23 seq51 113 4e-20 seq9 107 2e-18 >seq30 Length=1378366 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || |||| ||||| || || || ||| |||| |||| Sbjct 149002 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 148943 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||||| || ||| ||||| || || | ||| ||| ||| Sbjct 148942 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 148883 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||||| || ||||| || |||||||| ||||| || |||| || | ||||| ||| Sbjct 148882 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 148823 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| || ||||||||||||||| |||| || |||||| |||| || || Sbjct 148822 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGGTAT 148773 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| || || ||||||||||| || ||| |||| |||| Sbjct 148546 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 148487 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || ||||| ||||| || || | || || ||| Sbjct 148486 GATACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 148427 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | || ||||| || || ||||||||||| || |||| || | ||||| ||| Sbjct 148426 CAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAAC 148367 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || || ||||| |||||||||||| |||| |||||| || |||| || Sbjct 148366 ATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGG 148320 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || |||| |||||||| || || ||| || |||| Sbjct 148774 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 148715 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||||| ||| || || || ||||| | || ||| ||| Sbjct 148714 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 148655 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||||| |||||||| || || ||| | || ||| | ||| || | ||||| ||| Sbjct 148654 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 148595 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || || ||||||||||||||| |||| |||||||| |||| || || Sbjct 148594 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGAGGTGGTAT 148545 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || |||| ||||| ||||| || ||| |||| |||| Sbjct 149230 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 149171 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | |||| || ||| |||||||| || | || ||| ||| Sbjct 149170 GATACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAA 149111 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | || ||||| || || ||| | || ||| | |||| | | ||||| ||| Sbjct 149110 CAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAAC 149051 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || || ||||||||||| ||| |||| ||||| || |||| || || Sbjct 149050 ATCCAGAAGGAATCTACTCTTCACTTGGTTCTAAGACTAAGAGGTGGTAT 149001 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || |||| |||||||| || || ||| || |||| Sbjct 149458 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 149399 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||||| ||| || ||||| || || | || || ||| Sbjct 149398 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 149339 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||||| || ||||| || || || |||||||| | ||| | | ||||| || Sbjct 149338 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 149279 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || || ||||||||||||||| |||| ||||| || |||| || || Sbjct 149278 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGGTAT 149229 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 || ||||| ||| | ||||| || || || |||||||||||| || ||| || | || Sbjct 39415 GACCAACAAAGATTAATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGAC 39474 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 || ||||| ||||| ||||||||| ||||| |||| ||||||| |||| || || || Sbjct 39475 TACAACATCCAAAAGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGTATCAT 39533 >seq35 Length=1454894 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || ||||| || || || |||||||| ||||||||| ||| ||| || Sbjct 309125 AAGATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCT 309184 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || ||||| || || ||||| ||||| | || || Sbjct 309185 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGAC 309244 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | |||||||| || || |||||||||||| || ||| || |||| || Sbjct 309245 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 309304 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| ||||| || ||||| |||| ||||||| |||| || Sbjct 309305 AACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGG 309354 >seq51 Length=425556 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || |||| ||||| || |||||| || ||| |||| Sbjct 155402 ATGCAGATTTTCGTTAAGACTCTAACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCC 155343 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||||| ||| || || ||||| || | || ||| ||| Sbjct 155342 GATACCATTGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACCAA 155283 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | |||||||| || || ||| ||||||| || ||| | ||||||||||| Sbjct 155282 CAAAGATTAATCTTTGCCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATAAC 155223 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||| || ||||||||||| |||| |||||| || |||| || || Sbjct 155222 ATTCAAAAGGAGTCTACTCTGCATTTGGTTTTAAGACTAAGAGGTGGTAT 155173 Score = 102 bits (112), Expect = 7e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 || ||||| ||| | |||||||| || || |||||||||||| || ||| || ||||| Sbjct 52807 GACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCCGAT 52866 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 || ||||| ||||| ||||||||| ||||| |||| ||||||| |||| || || || Sbjct 52867 TACAACATCCAAAAGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGTATCAT 52925 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| |||| |||||||| || || || |||| | || Sbjct 155174 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 155115 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| ||| || ||||| || || | || || || Sbjct 155114 GACACCATCGACAACGTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 155055 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||||| |||||||| || |||||| | || ||| || ||| | | || |||||| Sbjct 155054 CAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGAACCTTATCTGACTATAAC 154995 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||| |||||||| | ||| |||| |||||| || |||| || Sbjct 154994 ATTCAAAAGGAATCTACCTTACACTTGGTTTTAAGACTAAGAGGTGG 154948 >seq9 Length=1454246 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || |||||||| ||||||||| || ||| |||| Sbjct 306884 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 306943 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || ||||| || || ||||| || || | || || ||| Sbjct 306944 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAA 307003 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | |||||||| || || |||||||||||| || ||| || |||| || ||| Sbjct 307004 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAAC 307063 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || ||||| ||||| || ||||| |||| | ||||| |||| || Sbjct 307064 ATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGG 307110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404115630028