Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq9 154 7e-33 seq21 123 1e-23 seq45 120 2e-22 seq35 113 2e-20 >seq9 Length=1454246 Score = 154 bits (170), Expect = 7e-33 Identities = 286/420 (68%), Gaps = 0/420 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || ||||| |||||||| | ||| ||||||||||| || | ||||||||||| Sbjct 634910 CATGAACAAATCAGGAATCCATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTT 634851 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || |||||| | | ||| | ||||||||| |||||||||||||||||||| ||||| Sbjct 634850 ACCATGGTTCTTTCTGATATCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATA 634791 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | || || || ||| || ||||||||||| || || | |||||| | || Sbjct 634790 AAGGGCGAATGCTCCAGGTCTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTT 634731 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 ||||| | |||||| | ||| ||| | ||| || || || | ||| | || Sbjct 634730 AAAAACACGAACCATTGGGATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGA 634671 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 || || || | ||| | ||| ||| | || || |||||||| || ||||| Sbjct 634670 ACCCGTAGAACGAATGTTATGAATATGCAACCCAATACCACCAGCAGTCTTGGAAATCAT 634611 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| ||| | || ||| |||| |||| ||| ||| ||||||| | | | Sbjct 634610 GGCACATTCTTTTAATGAATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAG 634551 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 |||||||| | | ||| | ||| | || |||| ||| || | || || | |||||| Sbjct 634550 GAAACAAGATGCCATTTGTGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATG 634491 >seq21 Length=613406 Score = 123 bits (136), Expect = 1e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || |||||||||||||| | |||| ||||||||||||| ||||| | ||| || Sbjct 173645 CTTCATGAACAAATCTGGAATCCATAGTGCAAAAAATAAATCTCTAGCTCTTAATTCATC 173704 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || || || |||||| ||| | | ||||||||||| |||||| ||||| ||||| || Sbjct 173705 CTTACCATGGTTCTTTCTTAACTGCAGGAAATCAAAAACATCTGAATGCCAGGGTTCCAA 173764 Query 26050 ATAGATAGCAAAAC-TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTT 26108 ||| ||| || || ||| | || ||| || || || || ||||| ||||| | Sbjct 173765 ATATATA-CAGTACGCACCCGGACGCTTGTTTCCTCCCTGGTCCACATATCTGGCAGTAT 173823 Query 26109 CATTGAAAACTTTCAACATTGGAACTA 26135 ||| ||||| | ||| ||||||| Sbjct 173824 TATTAAAAACACGTAGCATGGGAACTA 173850 >seq45 Length=1286020 Score = 120 bits (132), Expect = 2e-22 Identities = 292/437 (67%), Gaps = 14/437 (3%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || |||||||| ||||| | |||| ||||||||||| ||||||| ||| || || Sbjct 853566 CATGAACAAATCTGGTATCCATAGTGCAATGAATAAATCTCTGGCTCTCAATTCATCCTT 853625 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || || ||| ||| | || |||||||||| |||||| ||||| ||||| | ||| Sbjct 853626 ACCATGGTTTTTTCTTAATTGCAAAAAATCAAAAACATCTGAATGCCAGGGTTCCAGATA 853685 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 ||| | |||| | || ||| || || ||||| ||||| || || | ||| Sbjct 853686 TATACAGTATGCACCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTAGCCGTATTATT 853745 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 |||||| | ||| || | || |||| | |||| || || | | | | | Sbjct 853746 GAAAACACGAAGCATGGGGATTAGTCCACTAGAAATACCATTAGATCCCGATACATAAGC 853805 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACC---AGCCCATTTTGAAAT 26229 || ||| || || | ||||| |||||| |||||||| |||| || || || Sbjct 853806 CCCATTCGCCCTTATGTTAGAAGCATAAATACCAATTCCACCTGAAGCC---TTGGAGAT 853862 Query 26230 AGCTGCACAATC-TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288 | || ||| || || ||| ||| ||||| | || ||| ||||||| || | Sbjct 853863 AAGAGCTGTATCATGCAA-TGTTCGGAAGATTCCATCAATAGAATCCTCTTTCATACCAA 853921 Query 26289 ATAAAAAACAAGAAGATA---ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTG 26345 || |||||| ||||| | |||| || | |||||||| ||||| ||||| || | Sbjct 853922 CTAGAAAACAGGAAGAAAGATATTG---ATTAACTGTTCCTGCGTTAAACAATGTGGGCG 853978 Query 26346 TAGCATGAGTATAATAT 26362 |||||| || | ||| Sbjct 853979 ATGCATGAATAAAGTAT 853995 >seq35 Length=1454894 Score = 113 bits (124), Expect = 2e-20 Identities = 286/434 (66%), Gaps = 1/434 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| || || |||||||| | ||| || |||||||| || | | ||| || || Sbjct 638035 CATAAACAAGTCAGGAATCCATAGTGCTGGGAACAAATCTCTTGCACGAACTTCGTCCTT 637976 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || || || | | ||| | ||||||||| ||||| ||||||||||| || ||||| Sbjct 637975 ACCATGGTTTTTCCTAATATCAATGAAATCAAAGATATCAGAGTGCCATGGCTCCAAATA 637916 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||| ||| ||| || ||||| || || ||||| | |||||| | || Sbjct 637915 AAGGGCAAACGCACCAGGTCTCTTGTTACCACCCTGGTCCACGTAACGTGCAGTGTTGTT 637856 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 || || | ||| || | ||| ||| | ||| || || || | ||| | || Sbjct 637855 AAACACACGAACCATAGGGATTAAACCATTGGAAGTACCATTGGTACCTGCAATGTAAGA 637796 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 ||| || || | ||| | ||| || | || || |||||||| || || || Sbjct 637795 TCCGGTAGAACGAATGTTATGAATGTGCAACCCAATACCACCAGCAGTCTTGGAGATCAT 637736 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| ||| | |||||| | || |||| ||| ||| ||||||| | | | Sbjct 637735 GGCACATTCTTTTAGTGTATCATAGATACCTTCAATGGAATCTTCTTTCATCGCAACAAG 637676 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 |||||||| | | ||| | ||| | || |||| ||| || | || || | |||||| Sbjct 637675 GAAACAAGATGCCATTTGTGGATGTGGGGTACCTGCATTGAAAAGAGTTGGCGAAGCATG 637616 Query 26353 AGTATAATATCCTT 26366 || |||| |||| Sbjct 637615 GATAAAATA-CCTT 637603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039592921900