Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq16 127 2e-24 seq40 100 3e-16 >seq16 Length=789262 Score = 127 bits (140), Expect = 2e-24 Identities = 171/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 139843 AATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGT 139902 ||||||| | | | ||| ||||| || || ||||| |||||||||||| ||||| | Sbjct 623269 AATTATACGAAAGTAACATGGCCTCCGCGGCAGCAGTACCTTCATCTAATAATGATGCAT 623210 Query 139903 TTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCA 139962 | | || ||||| || || | || |||| | ||||| |||| || | || |||| Sbjct 623209 TGGATACAGGTAAACCAGTCAAATCACTGATAACTGTTTGAAAATTTAACAGAGACTCCA 623150 Query 139963 ATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCT 140022 |||| ||||||||||| || | |||||| |||||||| || || ||||| ||| ||| Sbjct 623149 ATCTGCCCTGAGATATTTCTGGTTGATATGGAGTGTATGAAGTATACCATTCGGGACTCT 623090 Query 140023 CAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080 | | || |||| | || ||||| ||| ||||||||| || || || | ||| || Sbjct 623089 CTAAGACATTTCTCATAATCACTGGCGGTAAAATGGTTCCGTAATAACCCTTACCAAT 623032 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 139294 CAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTC 139353 ||| || ||||| | || ||||| || |||||||| || || ||||| || | Sbjct 623839 CAGCCACGTTTGCCAAGAGCGCTTGCGCGGTGCAGATATTGGAAGTAGCTTTATCACGCT 623780 Query 139354 TAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCA 139413 |||||||||| ||||||||||||| |||| | ||||| || || | |||| Sbjct 623779 TAATATGCTGTTCTCTAGTTTGTAACGCTAGACGCAATGCAACGTTACCCAAACGGTCCT 623720 Query 139414 CTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGT--CTGTTGTTGCAAA 139471 ||| ||| |||||||| ||||| || ||| ||| | ||| ||| ||||| Sbjct 623719 TAGACACACCCACAATTCTACCAGGGATACGTCTATTA-AGGTGTTCCTG-AACCGCAAA 623662 Query 139472 GAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTG 139519 || |||||||||||||| ||||| || | || | ||||||||| || Sbjct 623661 AAAGGCAGCATGAGGACCACCGTAACCAAGTGGTACACCAAACCTCTG 623614 >seq40 Length=278800 Score = 100 bits (110), Expect = 3e-16 Identities = 165/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 139843 AATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGT 139902 ||||||| | | |||||| |||||||| || || || | ||||||| || ||||| | Sbjct 113236 AATTATACGAAAGCAGCATCGCCTCTGCGGCAGCGGTACCCTCATCTAGTAACGATGCAT 113177 Query 139903 TTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCA 139962 | | || || || || ||||| || || | || || |||| ||||| | |||| Sbjct 113176 TGGATACAGGCAAACCGGTAAGATCACAAATAACTGTCTGAAAATTTAATAAGGACTCCA 113117 Query 139963 ATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCT 140022 || ||||||||||| || | ||||| || || ||||| |||||||| || ||| Sbjct 113116 GCCTACCCTGAGATATTTCCGGCTGATATGGGGTATAAGAAGTGTACCATTCGGGGCTCT 113057 Query 140023 CAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080 | || || |||| | || || || ||| ||| ||||| || || || | ||| || Sbjct 113056 CTAGCACATTTCTCATGATCACCGGCGGTAAAATAGTTCCGTAATAACCCTTACCAAT 112999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997444652640