Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq52 105 1e-16 >seq52 Length=524665 Score = 105 bits (116), Expect = 1e-16 Identities = 225/334 (67%), Gaps = 9/334 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| | | ||||||||||| ||| || || ||||| || || ||| Sbjct 252992 ACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCATCAGACCCTTCTT 252933 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| | ||||||||||||| |||| || ||||| ||||| || || || |||||||| Sbjct 252932 CTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTTCAACTGCGGCAAA 252873 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTG-ATCCACTTCATCGC 794516 |||| | | || ||| || ||| | |||| | ||| |||||| | || || Sbjct 252872 TGCGACTAATCTTTCAGCATAA------AGGGCTTCTTCATCTTGAATCCACCTAATGGC 252819 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576 ||| |||||||||| || | | || | | || ||||| ||| | | || Sbjct 252818 CCATTCTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATTAAATAAGAAATCAGC 252759 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 ||| | |||| | |||||| || || | | ||||| || || ||||||||||| Sbjct 252758 CTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAGTGGATGTT 252699 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670 ||| || ||| ||||| || || ||||| ||| Sbjct 252698 TTCCATCATGATTTGGAACCCGTAGAAGCACTTG 252665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916232358557948