Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq35 134 1e-26 seq51 132 4e-26 seq9 125 6e-24 seq30 107 1e-18 >seq35 Length=1454894 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| ||||| ||||| || || | Sbjct 309354 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 309295 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 309294 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 309235 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| ||||| || ||| || | |||||| | || | |||||||||| ||| || Sbjct 309234 ATACCCTCCTTGTCCTG-AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 309176 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| || || || || || || || || || || ||||| |||||||| || Sbjct 309175 TTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 309125 >seq51 Length=425556 Score = 132 bits (146), Expect = 4e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| || | || ||||| |||||||||||||| || | | ||| | | ||| || Sbjct 154966 ACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTACCATCCTCT 155025 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| || ||| | || | ||||||||| || || |||||||| || |||||||| Sbjct 155026 AGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTG- 155084 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| |||| || || | || | |||||||| ||| || || | ||| |||||||| Sbjct 155085 AATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGTTTT 155144 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||| ||||| || ||||| Sbjct 155145 ACCAGTTAGAGTTTTCACAAAGATTTGCAT 155174 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| || || || || ||||||||||||||||| | | || | | || || Sbjct 155194 ACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTACCGTCTTCC 155253 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| || || ||| | || |||||||| || || || |||||||| ||||| || || Sbjct 155254 AGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCCTG- 155312 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| |||| ||||| | || | || || ||| ||| || || | || ||||| || Sbjct 155313 AATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTAATAGTCTT 155372 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| || ||||| || |||||||| Sbjct 155373 ACCAGTTAGAGTCTTAACGAAAATCTGCAT 155402 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | || ||||| ||||| ||||| ||||| | Sbjct 52919 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGAC 52860 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 52859 AACGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 52800 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| |||| ||||| | || | |||||||| ||| || Sbjct 52799 ATACCTTCCTTGTCCTG-AATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGAC 52741 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| || || || ||||| || || || |||| | ||||||| Sbjct 52740 CTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTGACAA--AACTGCATT 52694 >seq9 Length=1454246 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| ||||| ||||| || || | Sbjct 307110 CCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 307051 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 307050 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 306991 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| || | |||||| | || | |||||||||| ||| || Sbjct 306990 ATACCTTCCTTGTCCTG-AATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAAC 306932 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || || || ||||| |||||||| Sbjct 306931 CTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 306884 >seq30 Length=1378366 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || |||| || || || ||||| || || ||||| ||||| | | ||| | ||| Sbjct 148563 AGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCATCC 148622 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || |||||| | || | |||||| || || || ||||||||||| || || Sbjct 148623 TCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCC 148682 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| |||| ||||| | || | ||||| ||| || ||||| | ||| ||||| Sbjct 148683 TG-AATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGT 148741 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||||| || || || || || ||||| Sbjct 148742 TTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 148774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218580278612