Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01-
05] 132 sequences; 19,269,454 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq35 134 1e-26
seq51 132 4e-26
seq9 125 6e-24
seq30 107 1e-18
>seq35
Length=1454894
Score = 134 bits (148), Expect = 1e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||| ||||| || || |
Sbjct 309354 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 309295
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | ||| || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 309294 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 309235
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| ||||| || ||| || | |||||| | || | |||||||||| ||| ||
Sbjct 309234 ATACCCTCCTTGTCCTG-AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 309176
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||| || || || || || || || || || || ||||| |||||||| ||
Sbjct 309175 TTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 309125
>seq51
Length=425556
Score = 132 bits (146), Expect = 4e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
||||| || | || ||||| |||||||||||||| || | | ||| | | ||| ||
Sbjct 154966 ACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTACCATCCTCT 155025
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
|||||||| || ||| | || | ||||||||| || || |||||||| || ||||||||
Sbjct 155026 AGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTG- 155084
Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756
||| |||| || || | || | |||||||| ||| || || | ||| ||||||||
Sbjct 155085 AATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGTTTT 155144
Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||||| ||||| ||||| || |||||
Sbjct 155145 ACCAGTTAGAGTTTTCACAAAGATTTGCAT 155174
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
|||||||| || || || || ||||||||||||||||| | | || | | || ||
Sbjct 155194 ACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTACCGTCTTCC 155253
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
||||| || || ||| | || |||||||| || || || |||||||| ||||| || ||
Sbjct 155254 AGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCCTG- 155312
Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756
||| |||| ||||| | || | || || ||| ||| || || | || ||||| ||
Sbjct 155313 AATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTAATAGTCTT 155372
Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||||| || ||||| || ||||||||
Sbjct 155373 ACCAGTTAGAGTCTTAACGAAAATCTGCAT 155402
Score = 111 bits (122), Expect = 1e-19
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | || ||||| ||||| ||||| ||||| |
Sbjct 52919 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGAC 52860
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 52859 AACGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 52800
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || ||||| || ||| |||| ||||| | || | |||||||| ||| ||
Sbjct 52799 ATACCTTCCTTGTCCTG-AATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGAC 52741
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| ||||| || || || ||||| || || || |||| | |||||||
Sbjct 52740 CTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTGACAA--AACTGCATT 52694
>seq9
Length=1454246
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||| ||||| || || |
Sbjct 307110 CCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 307051
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | ||| || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 307050 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 306991
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || ||||| || ||| || | |||||| | || | |||||||||| ||| ||
Sbjct 306990 ATACCTTCCTTGTCCTG-AATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAAC 306932
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || || || || ||||| ||||||||
Sbjct 306931 CTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 306884
>seq30
Length=1378366
Score = 107 bits (118), Expect = 1e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| |||| || || || ||||| || || ||||| ||||| | | ||| | |||
Sbjct 148563 AGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCATCC 148622
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| ||||| || |||||| | || | |||||| || || || ||||||||||| || ||
Sbjct 148623 TCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCC 148682
Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| ||| |||| ||||| | || | ||||| ||| || ||||| | ||| |||||
Sbjct 148683 TG-AATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGT 148741
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| ||||||| || || || || || |||||
Sbjct 148742 TTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 148774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218580278612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |