Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq30 172 4e-38 seq52 165 6e-36 seq32 118 8e-22 >seq30 Length=1378366 Score = 172 bits (190), Expect = 4e-38 Identities = 401/598 (67%), Gaps = 20/598 (3%) Strand=Plus/Minus Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755 ||| ||||| | || || ||| |||||||||| || |||||| ||||| | |||| | Sbjct 666069 TAGATTTGTTCTTTTCCCCATTAAATATCATGAAATTTGGCAAGCTTACAAGAGAGCAGA 666010 Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC 43815 || |||||||||||||| |||||| | ||||| | || || || | |||||| | Sbjct 666009 AGCATCATTTTGGACAGCTGAAGAAATCGATTTATCGAAGGATTTGGATGATTGGAAT-- 665952 Query 43816 ATTAAAACCAC--AAG---AAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCG 43870 | ||| | | ||| ||| | |||| || || || | ||||| ||||| || Sbjct 665951 AATAAGATGAGTGAAGGTGAAAGATATTTCATTTCAAGAGTCCTAGCGTTCTTTGCAGCA 665892 Query 43871 AGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACC 43929 ||| || || || ||||| |||||||| || | | || || || ||| |||| Sbjct 665891 TCCGATGGTATTGTTAATGAGAATTTGGTGGAGAATTTCTCTGCT-GAGGTCCAAATACC 665833 Query 43930 AGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989 || || || || || ||||| || ||| || |||||||| ||||| |||| || Sbjct 665832 GGAGGCTAAGTGCTTCTACGGGTTCCAGATTATGATGGAAAATATCCATTCTGAAACTTA 665773 Query 43990 CAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGC 44049 || |||| ||||| |||| | |||| | || | | || |||||||| Sbjct 665772 TTCGCTATTGATTGATACCTACAGTAGAGATACCGAGGAAAGTGAATTTTTATTTAATGC 665713 Query 44050 GATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTC 44109 || |||| | || | || || | || ||||| ||||| ||| ||||| || Sbjct 665712 AATTGAAAACATTCCACCAATCAAGGAAAAGGCAGAATGGGCAATTAGGTGGAT----TC 665657 Query 44110 AA-ATGATTCT------TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162 || | ||| || | || ||| || | || || ||||| | |||||||| ||| Sbjct 665656 AAGACGATACTGCCCTTTATGCTGAAAGATTAGTGGCCTTTGCCGCAGTGGAAGGTGTTT 665597 Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222 |||| || ||||| ||||| ||||| |||||||| ||||| ||| | ||||| || | Sbjct 665596 TCTTCTCGGGATCATTTGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTAATGCCAGGTT 665537 Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 | || || || ||||| || || || | || ||||| || || ||||||||||| Sbjct 665536 TAACTTTCTCTAATGAATTGATCTGTAGAGACGAAGGTTTGCACACAGATTTTGCTTG 665479 >seq52 Length=524665 Score = 165 bits (182), Expect = 6e-36 Identities = 354/521 (68%), Gaps = 30/521 (6%) Strand=Plus/Minus Query 19354 TTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAA--- 19410 || |||||||| || || ||| || || || || || || ||| || || |||| Sbjct 112792 TTACTTTATGGTCCTCCAGGTACCGGTAAGACTTTGATCGCTAGAAAAATTGGTAAGATG 112733 Query 19411 TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTA 19470 ||| | |||| ||||| || ||||| |||||||| ||||| |||| |||||| || Sbjct 112732 TTAAATGCAAAGGAACCT---AAGATTGTGAATGGTCCAGAAATTTTAAGTAAATACGTG 112676 Query 19471 GGTCAATCGGAAGAAAATGTACG--ACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAAC 19528 || |||||||||||| | || || ||| | || || |||| ||| | | Sbjct 112675 GGGTCCTCGGAAGAAAATATTCGTAACCTTTTCAAG--GATGCAGAAGCCGAATATAG-- 112620 Query 19529 GTTTAGGGCGCAAAAGTTCT--TTGCACATTATAATACTAGATGAATTGGACGCAATCTG 19586 || || || || | | || ||||| || || || | ||||||||||| | | | Sbjct 112619 GTCTAAGGGTGAAGATTCCTCATTGCATATCATTATCTTTGATGAATTGGATTCTGTTTT 112560 Query 19587 TAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACT 19640 ||||||||||||||| || || | || || ||||| ||||||||||||| | Sbjct 112559 TAAGCAAAGAGGTTCGAGAGGTGATGGTACAGGCGTTGGTGACAATGTTGTCAATCAATT 112500 Query 19641 CCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700 || | || | || |||||| | ||| ||||||| ||| ||||||| || ||||| || Sbjct 112499 GCTAGCCAAGATGGATGGTGTTGATCAATTGAATAACATTCTAGTTATCGGTATGACCAA 112440 Query 19701 ---TAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGAT 19757 |||| || ||||| || | || |||||||| || ||| | || || | | | Sbjct 112439 CCGTAGA---GATTTAATTGATAATGCTTTATTACGTCCAGGTAGATTCGAGGTCCAAGT 112383 Query 19758 CGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAAC 19817 |||||| ||||||| |||||| || | || |||||||| | || || || || Sbjct 112382 GGAAATTCACTTACCAGATGAACAGGGTAGATTGCAAATTTTAGATATTCAGACCAAAAA 112323 Query 19818 CATGCGACAAAATAACCT--TTTAAATGACGATGTAGATCT 19856 ||| || |||||||| | || ||| | ||||| ||||| Sbjct 112322 GATGAGAGAAAATAACATGCTTGAAA--AGGATGTTGATCT 112284 >seq32 Length=902647 Score = 118 bits (130), Expect = 8e-22 Identities = 362/558 (65%), Gaps = 19/558 (3%) Strand=Plus/Minus Query 40749 TGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGG 40808 ||||| || |||||||||| | | |||||| ||||| || || || | |||||| Sbjct 747873 TGGTTCATTTCAGGTTGTACTGACGGTAAGAAGTTATCTGAGCAGGGCGTTAAAATTTGG 747814 Query 40809 AATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGT 40868 | | | | || | | ||| || || || ||||| || || || ||||||| Sbjct 747813 GAAGGCAATGGATCCAGAGAGTATCTGGATAAAATCGGATTGCACGACAGACGTGAAGGT 747754 Query 40869 GATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATA-TGACACTAT 40927 || ||||||||||| || || || || | | |||||||||| || ||||| || || | Sbjct 747753 GACCTTGGTCCTGTCTACGGTTTCCAATGGAGACATTTTGGTGCCAAATACAGAACCTGT 747694 Query 40928 GTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGATTAA 40987 | || |||||||| |||| | |||||||| || || || |||| ||||| Sbjct 747693 G-ACGACGATTATACTGGACAAGGGTTCGATCAATTGAAGGAGGTGATTGATA-AATTAA 747636 Query 40988 ATCCGATCCC-GATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATT 41046 | | ||| || || | || || || | |||||||| || | ||| | | Sbjct 747635 AAAATAACCCATATGATCGGAGAATTATTATGAGTGCGTGGAATCCGCCAGACTTTCCAC 747576 Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTT---------------T 41091 | |||||||| ||||| ||||| | || | || ||||||||| Sbjct 747575 TAATGGCATTACCACCATGTCACGTATTTTCACAATTTTACGTTAACTTCCCCAAGGAGG 747516 Query 41092 GCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCC 41151 |||| | || ||||||||| | ||||||| ||||| |||| ||||| | || || | Sbjct 747515 GCAAGCCTAAATTGTCATGTCTACTGTATCAGAGATCCTGTGATATGGGGTTGGGAGTTC 747456 Query 41152 CGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAA 41211 | || ||||| || || || || | || | ||||||||||| || | || | Sbjct 747455 CATTCAACATTGCATCCTACGCACTTTTGACCAAGATGATTGCACATGTGTGCGATATGG 747396 Query 41212 AACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGC 41271 ||||| ||||||| | || || | || |||| || || |||| |||| | || Sbjct 747395 AACCTAGTGAATTCATCCATACAATGGGTGATGCTCACATCTACAAGGATCATGTGGATG 747336 Query 41272 CGTTAACAGAACAACTGA 41289 | | | ||||||| ||| Sbjct 747335 CTCTGAAAGAACAATTGA 747318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455360592660