Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq35 100 3e-16 seq52 98.7 1e-15 seq9 93.3 5e-14 >seq35 Length=1454894 Score = 100 bits (110), Expect = 3e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 55744 GACGGTGTGGGAGATTCCACAGAAGA-GTCTGATTGACATGAGTGCTGATCGTGGTGCGT 55802 |||||||||||| ||| | || |||| | | ||||| ||| ||||||||| || Sbjct 639076 GACGGTGTGGGAAATTTCTCA-AAGACATGTTATTGATATGGCCGCTGATCGTTCCTTGT 639134 Query 55803 ACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 |||||| || || || || |||||||| |||| |||| || ||| || |||| Sbjct 639135 TCATCGATCAATCGCATTCCTTGAACATCCACATGCGCGCTCCTACAATGGGTAAATTGA 639194 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914 |||||||| || || ||||||||||| |||||||||||||||||||| Sbjct 639195 CAAGTATGCACTTCTATGGTTGGAAGAAGGGTCTCAAGACGGGTATGTACTA 639246 >seq52 Length=524665 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || |||| | ||||| ||||||| |||||||| || || || | || || Sbjct 253010 GGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACC 252951 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| || || |||||||||||||||||||||| ||| || || ||||||||| Sbjct 252950 TGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGAT 252891 Query 74870 GCCTTCGACACACGCAAAGGCGAC 74893 ||||| || ||||| ||||| Sbjct 252890 ACCTTCAACTGCGGCAAATGCGAC 252867 >seq9 Length=1454246 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAG-TCTGATTGACATGAGT 55786 |||| || | ||| |||||||||||| ||| | || |||| | | | |||||| | Sbjct 635935 TCAAAGATTTGTACAAGACGGTGTGGGAAATTTCTCA-AAGACATGTTCTAGACATGGCT 635993 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 |||||||||| || || ||| || || || || || |||| ||| |||| || Sbjct 635994 GCTGATCGTGCTGTGTTCATTGATCAATCTCATTCCTTGAATATCCACATGCGTGCCCCC 636053 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 || ||| || || | |||||||| ||||| ||||||||||| |||||||| ||| Sbjct 636054 ACAATGGGTAAATTAACAAGTATGCACTTCTACGGTTGGAAGAAGGGTCTCAAGACTGGT 636113 Query 55907 ATGTACTA 55914 |||||||| Sbjct 636114 ATGTACTA 636121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215097093600