Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq51 149 5e-31 seq35 134 1e-26 seq30 131 1e-25 seq9 131 1e-25 >seq51 Length=425556 Score = 149 bits (164), Expect = 5e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| ||||||| | || || ||| | ||| Sbjct 155402 ATGCAGATTTTCGTTAAGACTCTAACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCC 155343 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| ||| ||||| || |||||||| || || || || ||| Sbjct 155342 GATACCATTGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACCAA 155283 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | ||||| || ||| |||||||| || ||| | |||||||| ||| Sbjct 155282 CAAAGATTAATCTTTGCCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATAAC 155223 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||||||||||||| || | ||||||||||| Sbjct 155222 ATTCAAAAGGAGTCTACTCTGCATTTGGTTTT 155191 Score = 132 bits (146), Expect = 4e-26 Identities = 164/222 (74%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| || ||| |||| || ||| | || ||||| || || ||| | || ||| | ||| Sbjct 52702 TTTGTCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCATT 52761 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| ||| ||||| ||||| ||||| || ||||| || ||||| | || Sbjct 52762 GACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 52821 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAACATTCAAAA 27175 || | || || || ||||||||||| | | || |||| |||||||||||||| ||||| Sbjct 52822 ATCTTTGCTGGTAAGCAATTGGAAGA-TGGTAGAACGTTGTCCGATTACAACATCCAAAA 52880 Query 27176 GGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || || || |||||| | | ||| | ||||| || Sbjct 52881 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGTAT 52922 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||||| || || || |||| ||| | || |||||| | || Sbjct 155174 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 155115 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||||||||| ||||| || ||||| || || Sbjct 155114 GACACCATCGACAACGTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 155055 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | |||| | || || |||||| | || || || ||| | || || || ||| Sbjct 155054 CAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGAACCTTATCTGACTATAAC 154995 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||||||||||| || |||||||| |||||||| Sbjct 154994 ATTCAAAAGGAATCTACCTTACACTTGGTTTT 154963 >seq35 Length=1454894 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| |||| || ||| | ||||| || ||||| ||| | || Sbjct 309128 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTCT 309187 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || || || ||||| || ||| Sbjct 309188 GACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAA 309247 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||||||||||| || ||| | ||||| |||||| Sbjct 309248 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAAC 309307 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || ||||| || ||||| | | ||| | ||||| Sbjct 309308 ATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGG 309354 >seq30 Length=1378366 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| ||||| ||| |||| ||||| ||||||||| | || Sbjct 149002 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 148943 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || |||||||| ||||| || || || || ||| Sbjct 148942 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 148883 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | |||| | || || |||||||| |||||| || || | || ||||||||| Sbjct 148882 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 148823 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || || | || ||||| ||| | || | ||||| || Sbjct 148822 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGGTAT 148773 Score = 127 bits (140), Expect = 2e-24 Identities = 163/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| || ||| |||| || ||| | || ||| | || || ||| | || ||| | ||| Sbjct 39310 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCATT 39369 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| ||| ||||| ||||| ||||| || ||||| || ||||| | ||| Sbjct 39370 GACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTA 39429 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAACATTCAAAA 27175 || | ||| || || ||||||||||| | | || |||| || || |||||||| ||||| Sbjct 39430 ATCTTCGCTGGTAAGCAATTGGAAGA-TGGTAGAACGTTGTCTGACTACAACATCCAAAA 39488 Query 27176 GGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || || || |||||| | | ||| | ||||| || Sbjct 39489 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGTAT 39530 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| |||| || || | || ||| | ||||||||| | || Sbjct 148546 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 148487 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| |||||||| ||||| ||||| || || || || ||| Sbjct 148486 GATACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 148427 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || |||||||||||| || || | || ||||||||| Sbjct 148426 CAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAAC 148367 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 || || || ||||| || | || |||||||| Sbjct 148366 ATCCAGAAAGAGTCTACTCTGCACTTGGTTTT 148335 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||| ||| | || ||| | ||||||||| | || Sbjct 149230 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 149171 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | |||||| || || || |||||||||||||| || || || ||| Sbjct 149170 GATACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAA 149111 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||| | || || | || | || ||||||||| Sbjct 149110 CAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAAC 149051 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || ||||| || || | || |||||| Sbjct 149050 ATCCAGAAGGAATCTACTCTTCACTTGGTT 149021 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| || ||| ||||||| | || || ||| | || Sbjct 149686 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 149627 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || | | || || ||| || |||||||| ||||| || || || || ||| Sbjct 149626 GATACCATCAACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGACCAA 149567 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||| |||||||| || || | || ||||||||| Sbjct 149566 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 149507 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || ||||| ||| | || | ||||| || Sbjct 149506 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGGTAT 149457 >seq9 Length=1454246 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| |||| || ||| | ||||| || || || ||| | || Sbjct 306884 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 306943 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| ||||| || ||||| || ||| Sbjct 306944 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAA 307003 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||||||||||| || ||| | ||||| |||||| Sbjct 307004 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAAC 307063 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || ||||| || ||||| | | ||| | ||||| Sbjct 307064 ATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGG 307110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917682384640