Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq51 96.9 2e-15 seq30 87.8 1e-12 >seq51 Length=425556 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || || ||||| ||||| || |||||| | || || ||| || Sbjct 155402 ATGCAGATTTTCGTTAAGACTCTAACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCC 155343 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || |||| ||||| ||| || || ||||||||| |||| || | Sbjct 155342 GATACCATTGACAAC--GTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACC 155285 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| | ||||| |||||||| || ||| |||| |||| | | || |||||||| | Sbjct 155284 AACAAAGATTAATCTTTGCCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATA 155225 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 |||| ||||| ||| ||| ||||||||||||| Sbjct 155224 ACATTCAAAAGGAGTCTACTCTGCATTTGGTTTT 155191 >seq30 Length=1378366 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||||||||| | ||||| ||| || || | || || ||| | Sbjct 148546 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 148487 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| ||||| ||||| |||||| |||| || | Sbjct 148486 GATACTATCGATAAT--GTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACC 148429 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || | || |||||||| || || |||||||| |||| | | |||| ||||||| Sbjct 148428 AACAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACA 148369 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 ||||||| |||||| ||| |||| |||||||| Sbjct 148368 ACATCCAGAAAGAGTCTACTCTGCACTTGGTTTT 148335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355861827506364