Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq51 168 2e-36 seq30 161 2e-34 seq9 159 8e-34 seq35 152 1e-31 seq8 113 1e-19 >seq51 Length=425556 Score = 168 bits (186), Expect = 2e-36 Identities = 175/227 (77%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | ||| | ||| || || ||||||||||| ||||| | | || || || Sbjct 52908 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGACAACGTTCTACC 52849 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 52848 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 52789 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| |||||| || ||||| || |||||||||||| ||| ||||| |||||||| Sbjct 52788 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCTAGAGTGAT 52729 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT-TTATGGTTA 211124 ||||| || || | |||||| |||| | ||||||| ||| |||| Sbjct 52728 GGTCTTACCAGTCAAAGTCTTGACAA--AACTGCATTCCTATAGTTA 52684 Score = 156 bits (172), Expect = 1e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||||| || | || ||||| ||||| ||||| ||||||||||| | | ||||| Sbjct 155185 AGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTA 155244 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || |||||||| ||||| || || ||||| | | ||||||||| ||||||| ||||| Sbjct 155245 CCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCT 155304 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||| |||||| || ||||| || ||||| || || ||||||||| | || Sbjct 155305 TTATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTA 155364 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 || ||||| || || |||||||| || || | |||||| |||| Sbjct 155365 ATAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCATAATATG 155408 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||||| || | ||| | || || || ||||| |||||||| || | | ||| || Sbjct 154957 AGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTA 155016 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || || || || ||||| ||||| || | ||| |||||||| |||| |||||| Sbjct 155017 CCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCC 155076 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || |||||| || ||||| ||||||||||||||| ||| ||||| | |||| Sbjct 155077 TTGTCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTG 155136 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || ||||| || ||||| | ||||| Sbjct 155137 ATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 155174 >seq30 Length=1378366 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | ||| | ||| || || ||||||||||| || || | | || || || Sbjct 39516 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 39457 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || |||||||| | | |||||||||||| || | |||||||| Sbjct 39456 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 39397 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| |||||| || ||||| || |||||||||||| ||| ||||| | |||||| Sbjct 39396 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 39337 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| ||||| Sbjct 39336 GGTCTTACCAGTCAAAGTCTTGACAAA 39310 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||||||| || | ||||||||| || || || |||||||| ||||| | | || || Sbjct 149013 AGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTG 149072 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || || ||||| ||||| || || | | |||||||| ||||||| ||||| Sbjct 149073 CCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCT 149132 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| ||| ||||| ||||| || ||||| ||| || || | |||| Sbjct 149133 TTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAAGTG 149192 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| || || | |||||| Sbjct 149193 ATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 149230 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || ||||| ||||| || || || |||||||| ||||| | ||||| || || Sbjct 148559 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 148618 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || || ||||| || || ||||| || | ||||||||| ||||||| || ||||| Sbjct 148619 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 148678 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| |||||| || ||||| ||||||||||| || || || || | |||||| Sbjct 148679 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 148738 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || |||||||| || || | ||||| Sbjct 148739 AGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 148774 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||||||| || | ||| ||||| || || || ||||| || ||||| | || || || Sbjct 149241 AGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTG 149300 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||||||||||||||| || || || || || | |||||||| || |||| |||||| Sbjct 149301 CCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCC 149360 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| |||||| || ||||| ||||||||||| || || || || | |||| Sbjct 149361 TTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTG 149420 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || |||||||| || || | ||||| Sbjct 149421 ATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 149458 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||||||||| || || |||||||| ||||| | | || || || Sbjct 149471 TCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACC 149530 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || || || | | |||||||| ||||||| ||||| || Sbjct 149531 GTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCGTT 149590 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||||||| || ||||| | |||||| ||||| ||||||||| | || || Sbjct 149591 GTCTTGGATCTTTGACTTAACGTTGTTGATGGTATCAGAAGATTCAACCTCCAAGGTAAT 149650 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | |||||| || || | |||||| Sbjct 149651 AGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 149686 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||||| || | ||| ||||| |||||||| |||||||| ||||| | || || || Sbjct 148329 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 148388 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||| ||||| ||||| || || | | |||||||||||||||| |||||| Sbjct 148389 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 148448 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| || || ||| || || ||||| || ||||| ||| || || | |||| Sbjct 148449 TTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTG 148508 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | || || ||||| | ||||| Sbjct 148509 ATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 148546 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| ||||| || || || || ||||| ||||| | || || || || Sbjct 148787 TCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACC 148846 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | || || || || || || || | |||||||| || |||| |||||||| Sbjct 148847 GTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTT 148906 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || ||||| |||||||| ||||| ||| || || |||||||| Sbjct 148907 GTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGAT 148966 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| || || | ||||| Sbjct 148967 AGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 149002 >seq9 Length=1454246 Score = 159 bits (176), Expect = 8e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| ||||| | ||| | ||||| || ||||||||||| || || | | ||| || || Sbjct 307099 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 307040 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 307039 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 306980 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| ||||| || || || ||||| |||||||| ||||||||| || || || Sbjct 306979 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 306920 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| | |||||| ||||| | |||||| Sbjct 306919 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 306884 >seq35 Length=1454894 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||||||| | ||| | ||||| || ||||||||||| || || | | ||| || || Sbjct 309343 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 309284 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| || | || ||||| Sbjct 309283 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 309224 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| ||||| || || || || || |||||||| |||||| || || || || Sbjct 309223 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 309164 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| | |||||| ||||| | |||||| || Sbjct 309163 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 309125 >seq8 Length=1036679 Score = 113 bits (124), Expect = 1e-19 Identities = 363/557 (65%), Gaps = 10/557 (2%) Strand=Plus/Minus Query 139431 AATGTTGACCAACGAACATGGTACAGCCTCAAACATTAAGTCGCGAGTCAACAGGCTTTC 139490 |||||| || | ||| ||||||| || || |||||||| || |||| ||| | || || Sbjct 123149 AATGTTAACAGATGAATATGGTACCGCATCTAACATTAAATCAAGAGTTAACCGTCTATC 123090 Query 139491 TGTTCTTGGGGCGATCGTCTCTTGCCAGCAAAAGTTAAAACTTTTACGGGACGTCCCAAA 139550 ||| | || || ||| || |||||| ||||||||| | || ||| Sbjct 123089 CGTTTTATCTGCCATTACTTCTACTCAACAAAAGCTAAAACTTTACACTAAAGTTCCACC 123030 Query 139551 GAACGGACTTGTAATTTTTAGCGGAAGTGTTATGCTTCCCGAAGGCAAGGAGAAAAAGGT 139610 || || | || || | | | || | |||| | ||||| ||||| || || || Sbjct 123029 AAATGGTTTAGTTATCTATTGTGGTGATATTATCAATGAAGAAGGTAAGGAAAAGAAAGT 122970 Query 139611 TGCATTCGACATTGAACCTTTCCGTCCAATCAGCCAGAAAGTT-TACGCATGCGACAGTG 139669 | ||||||| || ||||||| ||||||| | | | || || || || | Sbjct 122969 TACATTCGATATCGAACCTTATAAGCCAATCAAC-ACATCCTTATATTTGTGTGATAACA 122911 Query 139670 TTTTCCATACGGATTGTCTGAAAGATCTGTTGTA---TGATGACCAATCTTATGGTTTTA 139726 |||||||| || ||| ||| ||| || | ||||||| ||| ||||| | Sbjct 122910 AATTCCATACTGAAGTTCTATCAGAACTGCTGGAAGCTGATGACAAATTC---GGTTTCA 122854 Query 139727 TTATCGTGGATGGCTCCGGTGTTTTATTTGCGACTCTTTCAGGAAGTACAAGAACAACAA 139786 || | ||||||| || || |||| | ||||| || | || ||||| Sbjct 122853 TTGTTATGGATGGTCAAGGATCCTTGTTTGGTTCGCTTTCTGGTAACACCAGAACCGTTT 122794 Query 139787 T-CTCGAGTTTCCAAGTTTGCCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTG 139845 | | | | ||| || ||| | |||||||| ||||| ||||| |||||||||||| || Sbjct 122793 TGCACAAATTTTCA-GTTGATTTACCAAAGAAACACGGTAGAGGTGGACAATCTGCTATG 122735 Query 139846 CGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAAC 139905 ||||| | | | | || | |||||||| || ||||| |||||||||| ||||| Sbjct 122734 CGTTTCGCACGTTTAAGAGAAGAAAAGAGACATAACTATGTGAGAAAAGTGGCAGAAGTT 122675 Query 139906 GCAATACAGTGTTTTATCAAAGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGT 139965 || |||| ||| |||| || | ||| | |||| ||| | ||||||| ||| Sbjct 122674 GCTGTACAAAATTTCATCACTAACGATAAGATTAATGTTAAAGGTTTGATTTTGGCTGGT 122615 Query 139966 TCCGCAGAGTTCAAGAC 139982 || ||||| |||||||| Sbjct 122614 TCAGCAGATTTCAAGAC 122598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150039584180