Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001972345.1_202017-01- 05] 132 sequences; 19,269,454 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq30 125 2e-23 seq51 120 7e-22 seq35 102 2e-16 seq9 102 2e-16 >seq30 Length=1378366 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || || || |||||||| || || |||||||||||||| | | ||||| || Sbjct 148559 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 148618 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || || || || ||||| || || || ||||| | | || || ||||| Sbjct 148619 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 148678 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| ||| ||||| | || | | |||| ||| ||| ||||| | ||| || Sbjct 148679 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 148738 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||| || || |||||||| ||||||| ||||| ||| |||| ||| Sbjct 148739 AGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCATACCACCTCTTAATCT 148789 Score = 111 bits (122), Expect = 4e-19 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || || || ||||||||||| | | |||||| || ||||||| Sbjct 148796 CAAG-TGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCGTCTTCTA 148854 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || || || || ||||| ||||| | | || |||||||| ||||| | Sbjct 148855 ATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGGA 148914 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | | || ||| || ||||| ||||| ||||| || | Sbjct 148915 TCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGATAGTCTTAC 148974 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 | || |||||||| ||||| | ||||| ||| |||| ||| Sbjct 148975 CGGTTAGAGTCTTAACGAAAATTTGCATACCACCTCTTAGTCT 149017 Score = 111 bits (122), Expect = 4e-19 Identities = 167/236 (71%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| || || | ||||||||||| || || |||||||||||||| | ||||||| Sbjct 149010 CTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTT 149069 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || || || || || || | ||||| ||||| | | || ||| Sbjct 149070 CTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCT 149129 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || || || || |||||| | || | | || ||| || ||||| | | Sbjct 149130 TCTTTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAA 149189 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || || || || || |||||||| ||||| | |||||| ||| |||| ||| Sbjct 149190 GTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCATACCACCTCTTAGTCT 149245 Score = 102 bits (112), Expect = 2e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||||||||| |||||||||||||| | | |||||| || ||||| | Sbjct 148340 CAAG-TGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCTTCCA 148398 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || || || | ||||| ||||| | | || |||||||| || |||| Sbjct 148399 ATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAA 148458 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | | || ||| || ||||| | ||| || ||||| | Sbjct 148459 TTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTTTTAC 148518 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 | || | || ||||| |||| ||||| ||| |||| ||| Sbjct 148519 CAGTCAAGGTTTTCACAAAGATTTGCATACCACCTCTTAATCT 148561 Score = 100 bits (110), Expect = 7e-16 Identities = 150/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || || |||||||||||||| | |||||||| || ||||| | Sbjct 149480 CAAG-TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACCGTCTTCCA 149538 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || || || | ||||| ||||||| | || ||||| || ||||| Sbjct 149539 GTTGCTTT--CCAGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCGTTGTCTTG 149596 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || ||| || || | | | | | || ||| || || || | |||||||| || Sbjct 149597 GATCTTTGACTTAACGTTGTTGATGGTATCAGAAGATTCAACCTCCAAGGTAATAGTCTT 149656 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||| | |||||| Sbjct 149657 ACCAGTCAAAGTCTTAACGAAAATCTGCAT 149686 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/199 (70%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||| || |||||||||||||| || | || ||||| |||||||| | Sbjct 39507 CAAG-TGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACCATCTTCCA 39449 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | || || ||||| | | ||| |||||||| || |||| Sbjct 39448 ATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGAA 39389 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | | |||| || || || || | ||| || || || | Sbjct 39388 TCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGTCTTAC 39329 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | || | |||||| || || Sbjct 39328 CAGTCAAAGTCTTGACAAA 39310 >seq51 Length=425556 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || | ||| ||||||||||| ||||| ||||| ||||||| |||||| Sbjct 155182 CTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTC 155241 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || ||||| || || ||||| ||||| | || || ||||| | | || ||| Sbjct 155242 CTACCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCT 155301 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || ||||| ||| ||||| | || | | | || ||| || || || | Sbjct 155302 TCTTTATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAG 155361 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || || || |||||||| ||||| | |||||| Sbjct 155362 GTAATAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT 155402 Score = 100 bits (110), Expect = 7e-16 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||| || ||||||||||||||||||| || ||||| |||||||| | Sbjct 52899 CAAG-TGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGACAACGTTCTACCATCTTCCA 52841 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | ||| |||||||| || |||| Sbjct 52840 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGAA 52781 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | | |||| || || || || ||||| || || || | Sbjct 52780 TCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCTAGAGTGATGGTCTTAC 52721 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | |||||| || | | ||||||| Sbjct 52720 CAGTCAAAGTCTTGAC--AAAACTGCATT 52694 >seq35 Length=1454894 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | || | || || || |||||||||||||| |||| || ||||| || Sbjct 309343 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 309284 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || ||||| | || || ||||| | | ||| || ||||| Sbjct 309283 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 309224 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| || |||||| | || | |||| ||| || ||||| || ||||| Sbjct 309223 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 309164 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || ||||| | |||||| || || | |||||| || Sbjct 309163 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 309125 >seq9 Length=1454246 Score = 102 bits (112), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | || | || || || |||||||||||||| |||| || ||||| || Sbjct 307099 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 307040 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || ||||| | || || ||||| | | ||| |||||||| Sbjct 307039 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 306980 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| || |||||| | || | |||| ||| || || || || ||||| Sbjct 306979 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 306920 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| | |||||| || || | |||||| Sbjct 306919 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 306884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818848600572