Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq780 120 3e-22 >seq780 Length=34333 Score = 120 bits (132), Expect = 3e-22 Identities = 200/287 (70%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| ||||| ||||| | ||| | || ||||| |||||||| || |||||| Sbjct 30303 ATATATGTATCGATCAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGA 30244 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 ||||| |||||||| || ||||| | || || || || || || || || ||| | Sbjct 30243 AATCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAACCAAG 30184 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || || || ||||| ||||| || |||||||| |||| ||||| || || || Sbjct 30183 TTTTCGTTGACGATGCCGTCCGAGGCGGCAAAAAAGGCCAGGATGTGGGAAACAAAGTAC 30124 Query 16652 TTTTCGTCA-GATGTA--AGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 ||||||||| || | | | | ||| || | || || ||||| | ||| | ||| Sbjct 30123 TTTTCGTCATCATTCAGGCGGTTGTTCCAGTCGTGCAAGTCCTTGGAGAGATCGATTTCC 30064 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||||||| ||| ||||||| || ||||||| |||||| Sbjct 30063 TCGGCTGTCCAAAAGGAGGCCTCTGCCTTCTTGTACATTTGCCAAAT 30017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511406850244920