Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq429 131 2e-25 >seq429 Length=24713 Score = 131 bits (144), Expect = 2e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||||||||| || ||||||| || |||||| || ||||| |||| ||| || Sbjct 5721 AGCTGTTGCTTCAGGGCGTCTACGTGGTCGACGTAGACATGGGCGTCACCCATGACATGC 5662 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | ||| || ||| | ||| | | ||| |||| ||||| ||||||||| | |||| Sbjct 5661 GTAAAGCTGCCAGGCACCAGGTCGCAAACGTGAGCGAGCATGTGGGTCAGCAGCGCGTAG 5602 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||||| |||||||||||||| || || |||||||| | || | ||| || ||||||||| Sbjct 5601 CTGGCAATGTTGAAGGGCACGCCGAGTCCCATGTCGCAAGACCTCTGATATAGCTGGCAG 5542 Score = 104 bits (114), Expect = 3e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 || ||||| ||||||| | ||| || | |||||| ||||||||| ||| ||||| Sbjct 5337 AGTTGGTCGACGCCCTTGTCGGTGTAGTCGGCCTTGGAATCCACGTACTGGGCTCCGAAA 5278 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 |||| |||||| || || |||||||| || ||||| ||| ||| | || || ||| Sbjct 5277 TGCCGCCACTGAAAGCCATAGACGGGGCCTAGGTCACCGACCTCGCGATGTGAGAGACCG 5218 Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 | | | ||||||| || || || ||||| | ||||| ||||||||||| Sbjct 5217 ACACTGTCGAGGAACTCGCGCGAGCCGTTCCCATCCCAAATCTTGACGCC 5168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590068088991240