Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq598 118 7e-22 seq574 105 4e-18 >seq598 Length=71582 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | |||||| ||||| ||||| ||||||||||| ||||| |||||| Sbjct 1633 TCCACCACGGAGGCGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATGTTATAGTCGCT 1574 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| ||| | || |||| || || || || || ||||| ||||| |||||| || Sbjct 1573 CAGAGTACGTCCATCTTCCAGTTGTTTTCCAGCAAATATGAGGCGCTGTTGGTCGGGAGG 1514 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||| || ||| | | | | |||| ||| | ||||| || Sbjct 1513 AATGCCTTCCTTGTCTTGTATTTTCGACTTCACGTTGTCAATCGTATCCGAAGATTCAAC 1454 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || || || || ||||| || |||||||| ||||| Sbjct 1453 TTCCAAGGTAATCGTCTTTCCCGTCAGAGTCTTGACAAAGATTTGCAT 1406 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| || ||||| ||||| |||||||| ||||||||||| || Sbjct 1404 CCTCCACGCAGACGCAGGACGAGGTGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGAG 1345 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | || || || ||||| || || ||||||||||| || Sbjct 1344 AGGGTCCGGCCATCCTCAAGTTGTTTTCCAGCGAATATCAGGCGCTGCTGGTCAGGAGGG 1285 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | | | | || | |||| ||||||||| Sbjct 1284 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGATTCGACT 1225 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| || || |||||||| | || || || ||||| ||||| Sbjct 1224 TCCAACGTAATCGTCTTGCCGGTTAATGTCTTGACGAAGATTTGCAT 1178 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||||| | || || || || || || |||||||| || |||||||||||| Sbjct 1176 CCGCCGCGCAAACGAAGGACAAGATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGAC 1117 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | |||||| || || || || || ||||| || || ||| Sbjct 1116 AGAGTTCGACCATCCTCGAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGGGA 1057 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| |||||| ||| | || | || | |||| ||||||||| Sbjct 1056 ATGCCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATGGTGTCGGACGATTCGACT 997 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || ||||| || | || || || || || ||||| Sbjct 996 TCCAGAGTGATCGTCTTGCCAGTCAACGTCTTGACGAATATTTGCAT 950 >seq574 Length=30825 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | ||| || ||||| | ||| || || ||||| |||||||||||| | Sbjct 26569 CCACCGCGAAGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 26628 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | |||||| || || || ||||| |||||||||||| ||| Sbjct 26629 ATGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGA 26688 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | | | || | || | || || || Sbjct 26689 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCAGAAGACTCCACC 26748 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || ||||| ||||| || |||||||||||| Sbjct 26749 TCAAGGGTGATTGTCTTCCCCGTGAGGGTTTTGACGAAGATCTGCATC 26796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067349883360