Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq677 145 2e-29
>seq677
Length=7370
Score = 145 bits (160), Expect = 2e-29
Identities = 414/624 (66%), Gaps = 23/624 (4%)
Strand=Plus/Minus
Query 248827 TTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAA 248886
|||| ||||| || ||||| || ||| | ||||| | || ||||||||||| ||
Sbjct 6326 TTTGGCTTCAAGACACTGGAACGTTCTTATTTGCTCAAGCTCGACGGCAAGATCGTTGAG 6267
Query 248887 CGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC 248946
|| ||| |||||| | ||||| || || || || || | || | ||| || |
Sbjct 6266 CGCCCTCAACACATGATCATGCGCGTTGCCGTGGGTAT--ATGGGGCGGCAATATCGACC 6209
Query 248947 GTG--CTCGAGACGTACACCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGA 249001
| | ||||||||||||| | ||| || | || | || ||||| | ||||
Sbjct 6208 GAGTCCTCGAGACGTACAACCTCATGTCCAGCAAGTTCT---TCACCCATGCGTCGCCGA 6152
Query 249002 CGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATG 249060
|||| ||||||||||| || | || | |||||| |||||||| || ||| ||||
Sbjct 6151 CGCTGTTCAACGCCGGCACGCCTC-AGTGTCAGCTTTCGTCGTGCTTCCTCGTTGACATG 6093
Query 249061 CAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAA 249119
| || ||| |||| ||||| || |||||||| || ||| | || | ||| || ||
Sbjct 6092 AAGGAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACATGC-GCCATGATCTCCAA 6034
Query 249120 ATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAAC--ATCCGAGCGAAGGGTTCGTACATC 249177
| || ||||| ||||| ||| || | || | ||||| || | ||||| |||||
Sbjct 6033 GATGGCCGGCGGCATCGGGCTCAACG--TGCATCGGATCCGTGCTACCGGTTCTTACATT 5976
Query 249178 AAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACC 249237
|| || || ||| | ||| || | ||| | ||||| ||| | ||
Sbjct 5975 GCCGGCACCAACGGGACTTCGAACGGTGTCATTCCCATGCTTCGTGTCTTCAACAATACG 5916
Query 249238 GCCAGGTTCATCAACCAGGCCGG----GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGA 249293
||| | | | || |||||| ||| || | ||| | | || ||||| || |||||
Sbjct 5915 GCCCGCTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTG-CCTTTGCCATATACTTGGA 5857
Query 249294 AGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCT 249353
||||||||||||| | || ||||| ||||| || |||||| | ||||| |||
Sbjct 5856 GCCGTGGCACGCCGATGTGTTTGAGTTTCTGGATCTGCGCAAGAACCATGGCAAGGAGGA 5797
Query 249354 CATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGT 249413
| | || || ||||||||| | ||||||| | | ||| |||||||| |||||
Sbjct 5796 GGTTCGGGCCCGCGACCTCTTCCTGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGCGT 5737
Query 249414 CAAGGCCGACGGCGATTGGACGCT 249437
|| ||||||||||||||||
Sbjct 5736 GGAGAAAAACGGCGATTGGACGCT 5713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073750152236608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |