Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq677 145 2e-29 >seq677 Length=7370 Score = 145 bits (160), Expect = 2e-29 Identities = 414/624 (66%), Gaps = 23/624 (4%) Strand=Plus/Minus Query 248827 TTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAA 248886 |||| ||||| || ||||| || ||| | ||||| | || ||||||||||| || Sbjct 6326 TTTGGCTTCAAGACACTGGAACGTTCTTATTTGCTCAAGCTCGACGGCAAGATCGTTGAG 6267 Query 248887 CGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC 248946 || ||| |||||| | ||||| || || || || || | || | ||| || | Sbjct 6266 CGCCCTCAACACATGATCATGCGCGTTGCCGTGGGTAT--ATGGGGCGGCAATATCGACC 6209 Query 248947 GTG--CTCGAGACGTACACCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGA 249001 | | ||||||||||||| | ||| || | || | || ||||| | |||| Sbjct 6208 GAGTCCTCGAGACGTACAACCTCATGTCCAGCAAGTTCT---TCACCCATGCGTCGCCGA 6152 Query 249002 CGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATG 249060 |||| ||||||||||| || | || | |||||| |||||||| || ||| |||| Sbjct 6151 CGCTGTTCAACGCCGGCACGCCTC-AGTGTCAGCTTTCGTCGTGCTTCCTCGTTGACATG 6093 Query 249061 CAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAA 249119 | || ||| |||| ||||| || |||||||| || ||| | || | ||| || || Sbjct 6092 AAGGAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACATGC-GCCATGATCTCCAA 6034 Query 249120 ATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAAC--ATCCGAGCGAAGGGTTCGTACATC 249177 | || ||||| ||||| ||| || | || | ||||| || | ||||| ||||| Sbjct 6033 GATGGCCGGCGGCATCGGGCTCAACG--TGCATCGGATCCGTGCTACCGGTTCTTACATT 5976 Query 249178 AAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACC 249237 || || || ||| | ||| || | ||| | ||||| ||| | || Sbjct 5975 GCCGGCACCAACGGGACTTCGAACGGTGTCATTCCCATGCTTCGTGTCTTCAACAATACG 5916 Query 249238 GCCAGGTTCATCAACCAGGCCGG----GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGA 249293 ||| | | | || |||||| ||| || | ||| | | || ||||| || ||||| Sbjct 5915 GCCCGCTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTG-CCTTTGCCATATACTTGGA 5857 Query 249294 AGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCT 249353 ||||||||||||| | || ||||| ||||| || |||||| | ||||| ||| Sbjct 5856 GCCGTGGCACGCCGATGTGTTTGAGTTTCTGGATCTGCGCAAGAACCATGGCAAGGAGGA 5797 Query 249354 CATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGT 249413 | | || || ||||||||| | ||||||| | | ||| |||||||| ||||| Sbjct 5796 GGTTCGGGCCCGCGACCTCTTCCTGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGCGT 5737 Query 249414 CAAGGCCGACGGCGATTGGACGCT 249437 || |||||||||||||||| Sbjct 5736 GGAGAAAAACGGCGATTGGACGCT 5713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073750152236608