Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq780 111 3e-19
>seq780
Length=34333
Score = 111 bits (122), Expect = 3e-19
Identities = 302/460 (66%), Gaps = 13/460 (3%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||||||||| || || || |||||||| |||||||| || || ||||| ||||||
Sbjct 30499 GTAGCCTTTGCTGCGGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGG 30558
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | || | ||||||| | |||| ||||| || ||||||| | ||
Sbjct 30559 CTCAAGAAACGTGGCCTAATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGAGAT 30618
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACC--- 102094
|| ||| | || || ||||| || | || | | | | | |||
Sbjct 30619 GAGGGTTTGCACACGGATTTTGCCTGTCTCCT-----ACACTCGCACTTCAAAAACCGGG 30673
Query 102095 CCATCAAGAGAAAGG--ATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAAT 102152
||| ||| | ||| || | ||| || |||| || |||||| || ||||||||||
Sbjct 30674 CCAGCAA---ACAGGTCATCCATGACATCATCACCGATGCCGTCACCATCGAACAAGAAT 30730
Query 102153 TTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGT 102212
||||||| | ||||||| |||| | || |||||| || ||||||| ||||
Sbjct 30731 TTCTCACCGAAGCCCTGCCCTGCGCATTACTCGGCATGAACGCCACCTTGATGAAGCAGT 30790
Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATG 102272
| || || || || || || || | || | |||| |||||| || |
Sbjct 30791 ATATCGAGTTCGTTGCCGACCGCCTTCTAGTCGCCCTGGGCAACGAAAAGGTGTACAGGT 30850
Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332
| |||||||| |||||||| || || || || | | ||||||||||||||||
Sbjct 30851 CGTCGAACCCCTTTGATTTCATGGAAAACATATCGCTAGGGGGCAAGACCAACTTTTTTG 30910
Query 102333 AAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGC 102372
|||| | |||| || || || ||| ||||||||
Sbjct 30911 AAAAACGGGTCGGTGACTACCAGAAGGCCGGTGTCATGGC 30950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989569026047855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |