Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq780 111 3e-19 >seq780 Length=34333 Score = 111 bits (122), Expect = 3e-19 Identities = 302/460 (66%), Gaps = 13/460 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||||||| || || || |||||||| |||||||| || || ||||| |||||| Sbjct 30499 GTAGCCTTTGCTGCGGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGG 30558 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | ||||||| | |||| ||||| || ||||||| | || Sbjct 30559 CTCAAGAAACGTGGCCTAATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGAGAT 30618 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACC--- 102094 || ||| | || || ||||| || | || | | | | | ||| Sbjct 30619 GAGGGTTTGCACACGGATTTTGCCTGTCTCCT-----ACACTCGCACTTCAAAAACCGGG 30673 Query 102095 CCATCAAGAGAAAGG--ATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAAT 102152 ||| ||| | ||| || | ||| || |||| || |||||| || |||||||||| Sbjct 30674 CCAGCAA---ACAGGTCATCCATGACATCATCACCGATGCCGTCACCATCGAACAAGAAT 30730 Query 102153 TTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGT 102212 ||||||| | ||||||| |||| | || |||||| || ||||||| |||| Sbjct 30731 TTCTCACCGAAGCCCTGCCCTGCGCATTACTCGGCATGAACGCCACCTTGATGAAGCAGT 30790 Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATG 102272 | || || || || || || || | || | |||| |||||| || | Sbjct 30791 ATATCGAGTTCGTTGCCGACCGCCTTCTAGTCGCCCTGGGCAACGAAAAGGTGTACAGGT 30850 Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332 | |||||||| |||||||| || || || || | | |||||||||||||||| Sbjct 30851 CGTCGAACCCCTTTGATTTCATGGAAAACATATCGCTAGGGGGCAAGACCAACTTTTTTG 30910 Query 102333 AAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGC 102372 |||| | |||| || || || ||| |||||||| Sbjct 30911 AAAAACGGGTCGGTGACTACCAGAAGGCCGGTGTCATGGC 30950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989569026047855