Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq598 120 3e-22 seq574 89.7 5e-13 >seq598 Length=71582 Score = 120 bits (132), Expect = 3e-22 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || ||||| | || | || | ||| |||||||| ||||| || || ||| | Sbjct 1176 CCGCCGCGCAAACGAAGGACAAGATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGAC 1117 Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | || |||| || |||||||| ||||||||| ||||||| || || ||||| || | Sbjct 1116 AGAGT--TCGACCATCCTCGAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGG 1059 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCC 139714 | ||||| || ||||| ||| | |||| || | | || | ||||||| | || Sbjct 1058 GAATGCCCTCCTTGTCC-TGAATCTTTGACTTCACATTATCGATGGTGTCGGACGATTCG 1000 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || | || | ||||||||| |||||||| || ||||||||||||||| Sbjct 999 ACTTCCAGAGTGATCGTCTTGCCAGTCAACGTCTTGACGAATATTTGCATA 949 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 139574 TCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||||| ||||||||||| ||||||| || | || | ||||| || ||||| |||||| | Sbjct 1596 TCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCA-TCTTCCAGTTGTTTTCCAGCAAA 1538 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 || || || || || |||||||| |||||||| ||||| ||||| || | | Sbjct 1537 TATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACGTT 1478 Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752 || | || || | | || || || | ||| | |||||| || |||| || || || Sbjct 1477 GTCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGTCTTTCCCGTCAGAGTCTTGAC 1418 Query 139753 GAATATTTGCATAGCT 139768 || ||||||||| || Sbjct 1417 AAAGATTTGCATACCT 1402 >seq574 Length=30825 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || || ||||| || |||||||| || | ||||||||||| || || ||| | Sbjct 26604 CTCCTTCTGGATGTTGTAGTCGCTCATGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAA 26663 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCT 139691 ||| || || ||||| ||||| || ||||| || || || ||| | || | || | | Sbjct 26664 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATC-CTGAATCTTGGACTTGACGT 26722 Query 139692 GTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751 || | ||||| | | ||||||||||| ||| | ||||| || || | ||||| | Sbjct 26723 TATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTGAGGGTTTTGA 26782 Query 139752 CGAATATTTGCAT 139764 |||| || ||||| Sbjct 26783 CGAAGATCTGCAT 26795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496056676855200