Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq598 120 3e-22
seq574 89.7 5e-13
>seq598
Length=71582
Score = 120 bits (132), Expect = 3e-22
Identities = 168/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || ||||| | || | || | ||| |||||||| ||||| || || ||| |
Sbjct 1176 CCGCCGCGCAAACGAAGGACAAGATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGAC 1117
Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655
| || |||| || |||||||| ||||||||| ||||||| || || ||||| || |
Sbjct 1116 AGAGT--TCGACCATCCTCGAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGG 1059
Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCC 139714
| ||||| || ||||| ||| | |||| || | | || | ||||||| | ||
Sbjct 1058 GAATGCCCTCCTTGTCC-TGAATCTTTGACTTCACATTATCGATGGTGTCGGACGATTCG 1000
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | ||||||||| |||||||| || |||||||||||||||
Sbjct 999 ACTTCCAGAGTGATCGTCTTGCCAGTCAACGTCTTGACGAATATTTGCATA 949
Score = 89.7 bits (98), Expect = 5e-13
Identities = 139/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 139574 TCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATA 139632
||||| ||||||||||| ||||||| || | || | ||||| || ||||| |||||| |
Sbjct 1596 TCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCA-TCTTCCAGTTGTTTTCCAGCAAA 1538
Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692
|| || || || || |||||||| |||||||| ||||| ||||| || | |
Sbjct 1537 TATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACGTT 1478
Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752
|| | || || | | || || || | ||| | |||||| || |||| || || ||
Sbjct 1477 GTCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGTCTTTCCCGTCAGAGTCTTGAC 1418
Query 139753 GAATATTTGCATAGCT 139768
|| ||||||||| ||
Sbjct 1417 AAAGATTTGCATACCT 1402
>seq574
Length=30825
Score = 89.7 bits (98), Expect = 5e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632
||| || || ||||| || |||||||| || | ||||||||||| || || ||| |
Sbjct 26604 CTCCTTCTGGATGTTGTAGTCGCTCATGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAA 26663
Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCT 139691
||| || || ||||| ||||| || ||||| || || || ||| | || | || | |
Sbjct 26664 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATC-CTGAATCTTGGACTTGACGT 26722
Query 139692 GTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751
|| | ||||| | | ||||||||||| ||| | ||||| || || | ||||| |
Sbjct 26723 TATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTGAGGGTTTTGA 26782
Query 139752 CGAATATTTGCAT 139764
|||| || |||||
Sbjct 26783 CGAAGATCTGCAT 26795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496056676855200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |