Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq677 156 6e-33
seq780 138 2e-27
>seq677
Length=7370
Score = 156 bits (172), Expect = 6e-33
Identities = 328/484 (68%), Gaps = 4/484 (1%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||||||||| || |||||||| || | ||| | |||||||| || |||||||| ||
Sbjct 5900 CAGGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACTTGGAGCCGTGGCACGCCGAT 5841
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| ||||| ||| | || ||||||| ||| |||| || |||| || ||| | |||
Sbjct 5840 GTGTTTGAGTTTCTGGATCTGCGCAAGAACCATGGCAAGGAGGAGGTTCGGGCCCGCGAC 5781
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
| || || || ||| | || || |||||||||||||||| | | ||| |
Sbjct 5780 CTCTTCCTGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGCGTGGAGAAAAACGGCGAT 5721
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || | ||||| ||| |||| |||| || || || |||
Sbjct 5720 TGGACGCTCATGTGCCCCAACGAATGCCCCGGCCTGGCCGACTGCTACGGTGATGAATTT 5661
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174
||||| |||| ||||||| |||||||| || ||||| || || |
Sbjct 5660 GAGGCTCTGTACGAAAAGTACGAGCGCGAGGGCCGTGGCCGCAAGACG-GTGCGGGCTC- 5603
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| || ||| | | ||| || || ||| || || || | ||| | || || |
Sbjct 5602 AGAAGCTCTGGTATTCTATCCTGGAAGCACAGACGGAAACGGGCAATCCCTTTATGCTGT 5543
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
||||||| | || ||||| || || ||| || |||||||||| | | || |
Sbjct 5542 ACAAGGACCACTGCAACCGCAAGAGTAATCAAAAGAACCTGGGCACCATTCGGAGTTCGA 5483
Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGG 97353
| || ||||||||||| || |||||| | | || ||||| || || ||| |||||
Sbjct 5482 ACCTTTGCACGGAAATCGTCGAGTACTCGGCACCTGACGAAGTCGCCGTCTGCAATCTGG 5423
Query 97354 CATC 97357
| ||
Sbjct 5422 CCTC 5419
>seq780
Length=34333
Score = 138 bits (152), Expect = 2e-27
Identities = 195/270 (72%), Gaps = 8/270 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|||||| |||||||||| ||||| |||||||||||||||| | ||| || |||||||
Sbjct 30017 ATTTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTTTGGACAGCCGAGGAAATCGATCTC 30076
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG---TTTATA 125135
||||||||| || |||| ||| | | || ||| ||| ||| | || ||| |
Sbjct 30077 TCCAAGGACTTGCACGACTGGAACAACCGCCTGAATGA---TGACGAAAAGTACTTTGTT 30133
Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTTGAC 125194
|| ||||| ||||||| ||||||| ||| || || ||||||||||| || | |||||
Sbjct 30134 TCCCACATCCTGGCCTTTTTTGCCGCCTCGGACGGCATCGTCAACGAAAACTTGGTTGA- 30192
Query 125195 ACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCAT 125254
|| ||| ||| | || || |||| ||||| |||||||| || |||||
Sbjct 30193 GCGGTTCAGCGGCGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGATTTCAGATCAT 30252
Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTC 125284
||| |||||| | ||||| || | |||||
Sbjct 30253 GATGGAGAACATCCACTCCGAGACATACTC 30282
Score = 132 bits (146), Expect = 7e-26
Identities = 345/517 (67%), Gaps = 23/517 (4%)
Strand=Plus/Plus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || ||||| || | |||| ||||| |||||| | ||| | || || |||| ||
Sbjct 30430 ATTCGCAAAAAAGCCGACTGGGCTATTCGCTGGATCCAGGACAAAAACTCGTCGTTTGCT 30489
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | |||| || || || || || |||||||||||||| ||| ||||| ||
Sbjct 30490 CAACGCTTGGTAGCCTTTGCTGCGGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCC 30549
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||||||||||| || || || ||||| || |||| ||||| | ||
Sbjct 30550 ATCTTCTGGCTCAAGAAACGTGGCCTAATGCCTGGCTTGACCTTTTCCAACGAACTCATT 30609
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGT 125600
|| ||||| ||||| | ||| || ||||| |||| || | || || ||
Sbjct 30610 TCGCGAGATGAGGGTTTGCACACGGATTTTGC-------CTGTCTC-CTACACTC-GCAC 30660
Query 125601 CCCGAGTGCAGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGG 125657
| | | | ||||| || |||||||| |||| | ||||||||||| |
Sbjct 30661 TTCAAAAACCGGGCCAGC---AAACAGGTCATCCATGACATCATCACCGATGCCGTCACC 30717
Query 125658 ATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGA-TTGGCATGAACTGCAA 125716
|| |||||||| ||||| |||||| |||| || | |||| | | ||||||||| ||
Sbjct 30718 ATCGAACAAGAATTTCTCACCGAAGCCCTGCC-CTGCGCATTACTCGGCATGAACGCCAC 30776
Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC-- 125774
| ||| |||| || ||||| || || || || || || || || |||
Sbjct 30777 CTTGATGAAGCAGTATATCGAGTTCGTTGCCGACCGCCTTCTAGTCGCCCTG---GGCAA 30833
Query 125775 CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833
|| ||| | |||| | ||| ||||||||||||||| | |||||| |||| |||
Sbjct 30834 CGAAAAGGTGTACAGGTCGTCGAACCCCTTTGATTTCATGGAAAACATATCGCTAGGGGG 30893
Query 125834 TAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
|||||||||||||| || || |||| | || |||
Sbjct 30894 CAAGACCAACTTTTTTGAAAAACGGGTCGGTGACTAC 30930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741048260113560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |