Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq598 95.1 1e-14
>seq598
Length=71582
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || ||||| || ||||||| | ||| | ||||| |
Sbjct 950 ATGCAAATATTCGTCAAGACGTTGACTGGCAAGACGATCACTCTGGAAGTCGAATCGTCC 1009
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | || || ||||||| ||||| || || || || || ||||||
Sbjct 1010 GACACCATCGATAATGTGAAGTCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAA 1069
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | || || | | || || || ||||| |||| | ||| | |||||| ||
Sbjct 1070 CAGCGCCTGATCTTTGCTGGTAAGCAGCTCGAGGATGGTCGAACTCTGTCCGACTACAAT 1129
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| ||||| || || | ||||| |||||
Sbjct 1130 ATTCAGAAAGAGTCCACGTTGCATCTTGTCCT 1161
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || |||||||| || || |||| || | ||| | ||||| |
Sbjct 1178 ATGCAAATCTTCGTCAAGACATTAACCGGCAAGACGATTACGTTGGAAGTCGAATCGTCC 1237
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| |||||| || || || || || ||||| || ||
Sbjct 1238 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 1297
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | || || | || || |||||||| || |||| | | | || ||||| |||
Sbjct 1298 CAGCGCCTGATATTCGCTGGAAAACAACTTGAGGATGGCCGGACCCTCTCTGACTACAAC 1357
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || ||||| || ||| | || || |||||| | || | |||||
Sbjct 1358 ATCCAGAAAGAGTCCACTTTGCACCTCGTCCTGCGTCTGCGTGGAGG 1404
Score = 89.7 bits (98), Expect = 5e-13
Identities = 162/237 (68%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| || || | || ||||| |||| ||| | ||| | |||||
Sbjct 1406 ATGCAAATCTTTGTCAAGACTCTGACGGGAAAGACGATTACCTTGGAAGTTGAATCTTCG 1465
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || || || | || || || || ||||| ||||| || |||||||| |||
Sbjct 1466 GATACGATTGACAACGTGAAGTCGAAAATACAAGACAAGGAAGGCATTCCTCCCGACCAA 1525
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | ||||| | | || |||||||| ||||||| | | | ||||||||||||
Sbjct 1526 CAGCGCCTCATATTTGCTGGAAAACAACTGGAAGATGGACGTACTCTGAGCGACTATAAC 1585
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAATATGA 27005
||||| |||||| ||| | || || || ||| | || | || ||| | |||||
Sbjct 1586 ATTCAGAAAGAAAGCACTTTGCACCTTGTGCTGCGCCTCCGTGGTGGACAGTTATGA 1642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478655333746320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |