Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq677 324 4e-83 >seq677 Length=7370 Score = 324 bits (358), Expect = 4e-83 Identities = 1007/1545 (65%), Gaps = 18/1545 (1%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || || |||| || ||| ||| || || || | | | ||| | || || Sbjct 6170 TTCACCCATGCGTCGCCGACGCTGTTCAACGCCGGCACGCCTCAGTGTCAGCTTTCGTCG 6111 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||||||||| |||| ||||| || |||| Sbjct 6110 TGCTTCCTCGTTGACATGAAGGAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACA 6051 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 || || | || ||||||| || ||||| || || | | || | || | ||||| Sbjct 6050 TGCGCCATGATCTCCAAGATGGCCGGCGGCATCGGGCTCAACG-TGCATCGGATCCGTGC 5992 Query 363726 -ACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | ||||||| |||||| | |||| ||||| || | ||||||||||| Sbjct 5991 TACCGGTTC-TTACATTGCCGGCACCAACGGGACT-TCGAACGGTGTCATTCCCATGCTT 5934 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || ||||||| || | |||||||||||||| || ||||| ||| || Sbjct 5933 CGTGTCTTCAACAATACGGCCCGCTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTGCC 5874 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || | ||||| || |||||| | ||||||||||| || || || || Sbjct 5873 TTTGCCATATACTTGGAGCCGTGGCACGCCGATGTGTTTGAGTTTCTGGATCTGCGCAAG 5814 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || ||||| | || || || || || ||| || || ||| || | ||| Sbjct 5813 AACCATGGCAAGGAGGAGGTTCGGGCCCGCGACCTCTTCCTGGCCCTGTGGATTCCGGAC 5754 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGT 364023 | || ||||||||||||||| | ||||| | ||| | ||||| ||||||| Sbjct 5753 CTGTTCATGAAGCGCGTGGAGAAAAACGGCGATTGGACGCTCATGTGCCCCAACGAATGC 5694 Query 364024 CCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083 || || || |||| | ||||| || | || ||||| ||||||||||| || Sbjct 5693 CCCGGCCTGGCCGACTGCTACGGTGATGAATTTGAGGCTCTGTACGAAAAGTACGAGCGC 5634 Query 364084 GAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG 364143 ||||| | || ||||| | | || |||||||| |||| | | ||| |||| | Sbjct 5633 GAGGGCCGTGGCCGCAAGACGGTGCGGGCTCAGAAGCTCTGGTATTCTATCCTGGAAGCA 5574 Query 364144 CAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203 |||| || || || | |||| |||| ||||||| || |||||||||||| || Sbjct 5573 CAGACGGAAACGGGCAATCCCTTTATGCTGTACAAGGACCACTGCAACCGCAAGAGTAAT 5514 Query 364204 CAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACAC 364262 || || |||| || || |||| | || | ||||| || || || || | || ||| | Sbjct 5513 CAAAAGAACCTGGGCACCATTC-GGAGTTCGAACCTTTGCACGGAAATCGTCGAGTACTC 5455 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA 364322 || || ||||| ||||| || || || || || | || || || || ||||| | Sbjct 5454 GGCACCTGACGAAGTCGCCGTCTGCAATCTGGCCTCACTAGCCCTGCCTGCCTTTGTCGA 5395 Query 364323 AGATG----GTACT--TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376 ||| | || | ||| |||| | || | || || || | || | Sbjct 5394 CTATGAACAGGGCTGCTACGACTTCCAGAAGCTCCACGAGGTGACGCAGGTTGTCGTCCG 5335 Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436 || ||| | | | | |||||| || |||| ||| || || ||| || Sbjct 5334 TAACCTCAATAGGATCATCGACGTCAACCATTACCCAGTTGAAGAGGCCCGCAACAGCAA 5275 Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496 ||||| || || ||||||||| | ||||| |||||||| || || | |||| || || Sbjct 5274 CATGCGGCACCGGCCGATTGGTGTGGGTGTCCAGGGCCTGGCCGATGCTTTTCTGGCTCT 5215 Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 | ||| | ||||| || || || || || | ||||| || | ||||| ||||| || Sbjct 5214 CCGCATGCCGTTTGAGTCTCCGGAGGCCCGGGAGCTAAACCAGCAAATCTTCGAAACCAT 5155 Query 364557 GTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTAC 364616 || ||||| ||| ||| ||| || |||| || | | | || ||||| | Sbjct 5154 CTACCACGCCGCCTTGAGTGCCTCGATGGAGCTGGCCAAGAGCGAAGGGCCCTACTCGTC 5095 Query 364617 TTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCC 364676 | | |||| || || ||| |||| |||||||||| | ||||| || | ||| Sbjct 5094 GTTTAAGGGATCGCCGGCGTCGGAGGGCGTGCTCCAGTTTGACATGTGGAAGGTGAAGCC 5035 Query 364677 ATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAA 364736 || | | ||| | ||||| |||||||| | | ||| ||||||| | ||||| Sbjct 5034 TTCAGAGCTCTGGGAGTGGGAAACGCTACGGGAGCAGATCAAGGAGCATGGCATACGCAA 4975 Query 364737 CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGA 364796 | || | ||| |||||||| ||||| || | ||||||||||| || ||||| Sbjct 4974 CAGTCTGCTGGTAGCCCCCATGCCGACGGCCAGCACGTCGCAGATCCTCGGCAATAACGA 4915 Query 364797 GTGCTTCGAACCGTTTACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854 ||||||||| || ||||| | ||| |||| || || || || | || || || Sbjct 4914 GTGCTTCGAGCC--TTACACGTCCAACATTTACCAGCGACGCGTGCTGGCGGGCGAGTTC 4857 Query 364855 CCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGC 364914 | ||| || || | || ||||||| || ||| || | ||| ||| Sbjct 4856 CAGGTGGTCAACCCCTGGCTGCTCAAGGACCTGGTTGACTTGGGCTTATGGTCGGACTCG 4797 Query 364915 ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAA 364974 ||||| ||| ||||| || | || || || | |||||||| || | || | Sbjct 4796 ATGAAAAACCGAATCATTGCGGAAAACGGGTCCATCCAGAACATCCCCAACATCCCTGCT 4737 Query 364975 GATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATG 365034 || | ||| | ||||||| || || ||||| ||||| |||| | | | ||| Sbjct 4736 GACGTCAAGGCACTTTACAAGACGGTCTGGGAGATTTCGCAGCGACAGGTGGTGCAGATG 4677 Query 365035 GCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079 |||||||| |||||||| |||||| ||| ||||||| | ||| Sbjct 4676 GCGGCCGACCGCGGTGCCTTTATCGACCAGTCCCAGTCGCTCAAC 4632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303333878223542