Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq598 95.1 1e-14 seq574 82.4 7e-11 >seq598 Length=71582 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || |||||||| || || ||||||| | |||||||| | | Sbjct 1178 ATGCAAATCTTCGTCAAGACATTAACCGGCAAGACGATTACGTTGGAAGTCGAATCGTCC 1237 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| || || || ||||| ||||| || || Sbjct 1238 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 1297 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || || || ||||| || |||| | | | | || || || ||| Sbjct 1298 CAGCGCCTGATATTCGCTGGAAAACAACTTGAGGATGGCCGGACCCTCTCTGACTACAAC 1357 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 1358 ATCCAGAAAGAGTCCAC 1374 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || |||| || | |||||||| | | Sbjct 950 ATGCAAATATTCGTCAAGACGTTGACTGGCAAGACGATCACTCTGGAAGTCGAATCGTCC 1009 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||||| ||||| || ||||| || || |||||| Sbjct 1010 GACACCATCGATAATGTGAAGTCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAA 1069 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | || ||||| ||||| |||| ||| | ||| || || Sbjct 1070 CAGCGCCTGATCTTTGCTGGTAAGCAGCTCGAGGATGGTCGAACTCTGTCCGACTACAAT 1129 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| ||||| || || Sbjct 1130 ATTCAGAAAGAGTCCAC 1146 >seq574 Length=30825 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || ||||| | || || || | || ||| | || || ||| | Sbjct 26799 CAAGATGCAGATCTTCGTCAAAACCCTCACGGGGAAGACAATCACCCTTGAGGTGGAGTC 26740 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||||||||| | ||||| |||||| || || || ||||| || ||||| Sbjct 26739 TTCTGACACCATCGATAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATTCCCCCCGA 26680 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || ||| | || || | | ||| ||||| |||||||||| | ||| | | ||||| || Sbjct 26679 CCAGCAGCGCCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGAACCATGAGCGACTA 26620 Query 24167 TAACATTCAAAAAGA 24181 ||||| || || || Sbjct 26619 CAACATCCAGAAGGA 26605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429929811743055