Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq677 237 1e-57 seq574 91.5 1e-13 seq1010 89.7 5e-13 seq598 82.4 7e-11 >seq677 Length=7370 Score = 237 bits (262), Expect = 1e-57 Identities = 986/1522 (65%), Gaps = 49/1522 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| |||||||| |||| ||| || ||| || | ||| |||||| | || Sbjct 4846 TTGACCACCTGGAACTCGCCCGCCAGCACGCGTCGCTGGTAAATGTTGGACGTGTAAGGC 4905 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||||||||| ||||| || | || | || || |||||| || ||| Sbjct 4906 TCGAAGCACTCGTTATTGCCGAGGATCTGCGACGTGCTGGCCGTCGGCATGGGGGCTACC 4965 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | ||| |||| |||||| | ||| |||||| |||| |||| Sbjct 4966 AGCAGACTG--TTGCGTATGCCATGCTCCTTGATCTGCTCCCGTAGCGTTTCCCACTCCC 5023 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGG 145294 | ||| | ||| |||| | ||||||||| |||| | | ||||| || | ||| | Sbjct 5024 AGAGCTCTGAAGGCTTCACCTTCCACATGTCAAACTGGAGCACGCCCTCCGACGCCGGCG 5083 Query 145295 CTGCCTTGAAAGGAACTGTAACTGCCCCAAG-TTTTGGCGAGCTCGCAACTCGCCTC-CA 145352 | |||| ||| || || | |||| | | ||||| ||||| || | | | | || Sbjct 5084 ATCCCTT-AAACGACGAGT-AGGGCCCTTCGCTCTTGGCCAGCTC-CATCGAGGCACTCA 5140 Query 145353 GAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCT 145412 ||| || || || || ||| |||||| ||| ||| | || || || Sbjct 5141 AGGCGGCGTGGTAGATGGTTTCGAAGATTTGCTGGTTTAGCTCCCGGGCCTCCGGAGACT 5200 Query 145413 CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGG 145472 | |||||||||| || | |||||||||||| || ||||| | ||||| || || | Sbjct 5201 CAAACGGCATGCGGAGAGCCAGAAAAGCATCGGCCAGGCCCTGGACACCCACACCAATCG 5260 Query 145473 GCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532 |||| || ||||||||| | | ||| || | || || | || |||||| | Sbjct 5261 GCCGGTGCCGCATGTTGCTGTTGCGGGCCTCTTCAACTGGGTAATGGTTGACGTCGATGA 5320 Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACC 145592 | |||| | ||| || || || |||| || | | | | ||| | ||||| | | Sbjct 5321 TCCTATTGAGGTTACGGACGACAACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTAGC 5380 Query 145593 GAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCG 145652 ||| ||| | | ||| || | | ||| | || |||| ||| || || || Sbjct 5381 AGCCCTGTTCATAGTCGACAAAGGCAGGCAGGGCTAGTGAGGCCAGATTGCAGACGGCGA 5440 Query 145653 TCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 || || || | || ||| | ||||| || | ||| | || || ||||| Sbjct 5441 CTTCGTCAGGTGCCG-AGTACTCGACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTG 5499 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 ||||| || | |||||||| || | |||||| ||||||||| ||||| | || | Sbjct 5500 CCCAGGTTCTTTTGATTACTCTTGCGGTTGCAGTGGTCCTTGTACAGCATAAAGGGATTG 5559 Query 145772 CCAGTCTCCACCTGCGTCTCCACGATAAAA---CGGTGCAAGTCCTGCGCACGCACCTGC 145828 || || ||| ||| | |||| |||| || | | || | ||| || |||||| | Sbjct 5560 CCCGTTTCCGTCTGTGCTTCCAGGATAGAATACCAGAGC---TTCTGAGCCCGCACCGTC 5616 Query 145829 TGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAG 145888 | || |||||||| ||||| || ||| || ||||||| | ||||||| Sbjct 5617 TTGCGGCCACGGCCCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCACCGTAG 5676 Query 145889 CAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTG 145948 || |||| ||||||||| || | |||||| ||||| |||| ||| ||||||| | Sbjct 5677 CAGTCGGCCAGGCCGGGGCATTCGTTGGGGCACATGAGCGTCCAATCGCCGTTTTTCTCC 5736 Query 145949 ACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAA 146008 ||||||| ||| |||| || || | |||||| || | | |||||| || | | Sbjct 5737 ACGCGCTTCATGAACAGGTCCGGAATCCACAGGGCCAGGAAGAGGTCGCGGGC---CCGA 5793 Query 146009 TCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCC 146063 |||| | ||||| ||| || || || || | ||| | | | || ||||||| Sbjct 5794 ACCTCCTCCTTGCCATGGTTCTTGC-GCAGATCCAG-AAACTCAAACACATCGGCGTGCC 5851 Query 146064 ACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGAC 146120 |||| || | || | ||| | ||| ||| || ||||| |||||||| |||| | Sbjct 5852 ACGGCTCCAAGTATATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGC 5911 Query 146121 GTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAG 146180 | || | ||||| ||||| || | |||||| ||| ||| | | ||||| || Sbjct 5912 GGGCCGTATTGTTGAAGACACGAAGCATGGGAATGACACCGTTCGAAGTCCCGTTGGTGC 5971 Query 146181 AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGT 146240 | || | ||| | || | | ||| || || | |||| |||||| | Sbjct 5972 CGGCAATGTAAGAACCGGTAGCACGGATCCGATGCACGTTGAGCCCGATGCCGCCGGCCA 6031 Query 146241 ACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GC 146297 |||||| || |||||| ||| |||||| ||||||||||| || ||||| || | Sbjct 6032 TCTTGGAGATCATGGCGCATGTC-TTGAGCGTGTCGTAGATGCCCTCGATGCTGTCCTCC 6090 Query 146298 TTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACA 146357 ||| ||| | | || |||||||| | | ||| | ||||| || || ||||| Sbjct 6091 TTC--ATGTCAACGAGGAAGCACGACGAAAGCTGACACTGAGGCGTGCCGGCGTTGAACA 6148 Query 146358 ACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGC-- 146415 |||||| ||| || || || | || | | ||| | ||||| |||| | Sbjct 6149 GCGTCGGCGACGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTACGTCTCGAGGACTC 6208 Query 146416 -GTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 ||| | || || | |||| || |||| || |||||||||| ||||||||| || | Sbjct 6209 GGTCGATATTGCCG-CCCCAT--ATACCCACGGCAACGCGCATGATCATGTGTTGAGGGC 6265 Query 146475 GCTCCGCCA-CTTGATTGTCAATCTTTAACAAATA--GCCGTTCTCCAGGGTTTTGTATC 146531 |||| | | |||| ||| | ||| | |||||| ||| ||||| || ||| | | Sbjct 6266 GCTCAACGATCTTG-CCGTCGAGCTTGAGCAAATAAGAACGT--TCCAGTGTCTTGAAGC 6322 Query 146532 CGAAAAATTTGTACGTATAGTC 146553 | ||| | | ||| || |||| Sbjct 6323 CAAAATACTGGTAGTTAAAGTC 6344 >seq574 Length=30825 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||||| || | || | || |||||| || |||||||| ||||| Sbjct 26568 GCCACCGCGAAGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 26627 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 |||||| || || || |||||||| || || |||| | ||||||||||| || || Sbjct 26628 CATGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGG 26687 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || || || ||||| | || | || || | ||||| | Sbjct 26688 AATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCAGAAGACTCCAC 26747 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || || ||||| ||||| |||||||| Sbjct 26748 CTCAAGGGTGATTGTCTTCCCCGTGAGGGTTTTGACGAAGATCTGCAT 26795 >seq1010 Length=27177 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 ||||||| |||||||||||| || || || |||||| ||||||||||| ||| ||| Sbjct 25515 CCTTTTGGATGTTGTAATCGGACAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 25574 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | || || || |||||||| || || || || || || || |||| | | Sbjct 25575 TCAGTCGTTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTGGATTTGACATTAT 25634 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | ||||||| |||| ||| | ||| || || ||||| || ||||||| Sbjct 25635 CGATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTTACGA 25694 Query 131225 AA 131226 || Sbjct 25695 AA 25696 >seq598 Length=71582 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||||||||| || || || | ||||| || ||||| || ||||| ||||| ||| | Sbjct 948 CCACCGCGCAAGCGAAGGACAAGATGTAGCGTTGACTCTTTCTGAATATTGTAGTCGGAC 889 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | || | ||||| | ||| || || || |||| || || || ||||| ||||| Sbjct 888 AGGGTCCTGCCA-TCCTCCAACTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCGGGAGG 830 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183 || || || ||||| ||| || ||||| | || | |||||| | ||||| Sbjct 829 AATACCCTCCTTGTCCTGGATCTTGGACTTGACATTATCGATAGTATCAGACGACTC 773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472005831911040