Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq780 109 6e-19 >seq780 Length=34333 Score = 109 bits (120), Expect = 6e-19 Identities = 226/334 (68%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGA 93374 ||||| ||||| || || || || |||| | | | |||| | || |||||||||| Sbjct 30348 GTTTCAATAGCATTGAAGAGATAGGTCCGCTGGGC--ATTCTCCTTGATATATGTATCGA 30291 Query 93375 TTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAAC 93434 | | || || || | || || |||| |||||||| || || ||||||||||| | Sbjct 30290 TCAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGAAATCCGTAGAAGC 30231 Query 93435 ATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTA 93494 | | || || | |||||| || || || | ||| || | ||||| ||||| | Sbjct 30230 AACGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAACCAAGTTTTCGTTGACGA 30171 Query 93495 TACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTT 93554 | || || || || |||||||| |||| || || | ||| | || || ||||| | Sbjct 30170 TGCCGTCCGAGGCGGCAAAAAAGGCCAGGATGTGGGAAACAAAGTACTTTTCGTCATCAT 30111 Query 93555 TAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611 | | | || | ||| ||| | || || || ||||||| ||| ||| | ||||||| Sbjct 30110 TCAGGCGGTTGTTCCAGTCGTGCAAGTCCTTGGAGAGATCGATTTCCTCGGCTGTCCAAA 30051 Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 | || || ||||| || |||||||| | ||| || Sbjct 30050 AGGAGGCCTCTGCCTTCTTGTACATTTGCCAAAT 30017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556852579342440