Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq780 109 6e-19
>seq780
Length=34333
Score = 109 bits (120), Expect = 6e-19
Identities = 226/334 (68%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGA 93374
||||| ||||| || || || || |||| | | | |||| | || ||||||||||
Sbjct 30348 GTTTCAATAGCATTGAAGAGATAGGTCCGCTGGGC--ATTCTCCTTGATATATGTATCGA 30291
Query 93375 TTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAAC 93434
| | || || || | || || |||| |||||||| || || ||||||||||| |
Sbjct 30290 TCAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGAAATCCGTAGAAGC 30231
Query 93435 ATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTA 93494
| | || || | |||||| || || || | ||| || | ||||| ||||| |
Sbjct 30230 AACGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAACCAAGTTTTCGTTGACGA 30171
Query 93495 TACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTT 93554
| || || || || |||||||| |||| || || | ||| | || || ||||| |
Sbjct 30170 TGCCGTCCGAGGCGGCAAAAAAGGCCAGGATGTGGGAAACAAAGTACTTTTCGTCATCAT 30111
Query 93555 TAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611
| | | || | ||| ||| | || || || ||||||| ||| ||| | |||||||
Sbjct 30110 TCAGGCGGTTGTTCCAGTCGTGCAAGTCCTTGGAGAGATCGATTTCCTCGGCTGTCCAAA 30051
Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
| || || ||||| || |||||||| | ||| ||
Sbjct 30050 AGGAGGCCTCTGCCTTCTTGTACATTTGCCAAAT 30017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556852579342440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |