Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq18 113 9e-20 seq736 86.0 1e-11 >seq18 Length=47405 Score = 113 bits (124), Expect = 9e-20 Identities = 168/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| |||||| || || || || || || || ||||| || ||||| ||||| Sbjct 10178 CTCTCGTATTGCTGTCATCGGTCCGAACGGAGCTGGCAAATCTACACTGATCAATGTCCT 10237 Query 280220 GACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGG 280278 || |||||| | || || |||||||| | | ||||| ||||| || || | Sbjct 10238 TACCGGCGAG-CTCATTCCGACTGAGGGTGAGATCTACCAGCATGAAAACATCCGCATCG 10296 Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338 | ||| || ||||| |||||| ||||||||| ||||| |||||| ||| ||| | Sbjct 10297 CCTACATCAAGCAGCATGCTTTCGCCCACATCGACAACCATTTGGACAAGACGCCTTCCG 10356 Query 280339 AATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 |||| ||||||||||| | | || | ||| |||||| ||| || |||| || Sbjct 10357 AATATATTCAGTGGCGAT-TCCAGACTGGTGAGGATCGCGAGACGATGGACCG 10408 >seq736 Length=119192 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 ||||| || ||||| || || |||||||||||||| || | | |||||||| || | Sbjct 20681 GTAGGCTCCCTGTCCGGAGGCTGGAAGATGAAGCTCGCTTTGGCCCGCGCCATGCTGCAA 20622 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 ||||||||||| || || ||||| || || ||||| | ||| ||||| | ||| Sbjct 20621 AAGGCCGATGTCCTCCTTCTCGATGAACCGACGAACCATTTAGACGTGACCAATATTGCC 20562 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875 ||||| | | ||| || | | || | | | || ||||| ||||| |||||| Sbjct 20561 TGGCTGGAGAACTATCTCAAGACTCACACCGACATCACTAGTCTCATCGTCTCCCACGAC 20502 Query 279876 TCTGGCTTCCTAGAT 279890 || ||||| || ||| Sbjct 20501 TCAGGCTTTCTGGAT 20487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027821247223221