Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq598 134 1e-26
seq1010 86.0 5e-12
>seq598
Length=71582
Score = 134 bits (148), Expect = 1e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250
|||||| |||||||| || ||||||| |||||| |||||| |||||||| ||||| |
Sbjct 1597 TTCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCAGCAAA 1538
Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310
||||| ||||||||||| |||||||||||||| ||||| || || || | |
Sbjct 1537 TATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACGTT 1478
Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|||| || || | ||||| || |||| ||| | ||| || || |||||||| || ||
Sbjct 1477 GTCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGTCTTTCCCGTCAGAGTCTTGAC 1418
Query 114371 AAAAATCTGCAT 114382
||| || |||||
Sbjct 1417 AAAGATTTGCAT 1406
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | || || | || | || || ||||| || |||||||| ||
Sbjct 1407 ATACCTCCACGCAGACGCAGGACGAGGTGCAAAGTGGACTCTTTCTGGATGTTGTAGTCA 1348
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||| ||||||||||| |||||| | || || ||||| ||||| |||
Sbjct 1347 GAGAGGGTCCGGCCATCCTCAAGTTGTTTTCCAGCGAATATCAGGCGCTGCTGGTCAGGA 1288
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || || || |||||| || | | || | |||||||| ||||||
Sbjct 1287 GGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGATTCG 1228
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||| |||||||| | || || || || || |||||
Sbjct 1227 ACTTCCAACGTAATCGTCTTGCCGGTTAATGTCTTGACGAAGATTTGCAT 1178
>seq1010
Length=27177
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
||||| |||||||||||| || || || || ||||| || || || ||| ||||
Sbjct 25517 TTTTGGATGTTGTAATCGGACAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 25576
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
|| || ||||| |||||||||||||| || || || |||||| ||| | | ||
Sbjct 25577 AGTCGTTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTGGATTTGACATTATCG 25636
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| ||||| | || ||||| || | ||| | || ||||| || || || ||||| |||
Sbjct 25637 ATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTTACGAAA 25696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420128352821772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |