Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq574 82.4 6e-11 >seq574 Length=30825 Score = 82.4 bits (90), Expect = 6e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTG-TCG 33968 || ||||| || || || || |||||||||||||| |||||||| || || || | ||| Sbjct 26578 AGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCATGGTTCG 26636 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || || | ||||| |||||||| || ||||||||||| || || | || ||| Sbjct 26637 GCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTC 26696 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 || ||| ||| || ||| | | | | | |||| ||| || || | || Sbjct 26697 CTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCAGAAGACTCCACCTCAAGGGT 26756 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 ||||| || || || || ||||| || ||||| ||||| || Sbjct 26757 GATTGTCTTCCCCGTGAGGGTTTTGACGAAGATCTGCATCTT 26798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397056684907162