Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq598 156 1e-32
seq1010 98.7 2e-15
>seq598
Length=71582
Score = 156 bits (172), Expect = 1e-32
Identities = 178/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 288235 ATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATA 288294
||||||| |||||||| ||||| | || || || || | ||||||||||| || ||
Sbjct 1644 ATTCATAACTGTCCACCACGGAGGCGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATG 1585
Query 288295 TTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGT 288354
||||||||| || || ||||| ||||| | ||||||||| || || || || ||||||
Sbjct 1584 TTATAGTCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCAGCAAATATGAGGCGCTGT 1525
Query 288355 TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG 288414
|| || || ||||| || || || ||||||| |||||||| || || | |||
Sbjct 1524 TGGTCGGGAGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACGTTGTCAATCGTATCC 1465
Query 288415 CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| | || |||||||| || |||||||||||||| || || |||||
Sbjct 1464 GAAGATTCAACTTCCAAGGTAATCGTCTTTCCCGTCAGAGTCTTGACAAAGATTTGCAT 1406
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| | | ||| || ||||| | |||| ||||| || ||||| |||||||
Sbjct 1176 CCGCCGCGCAAACGAAGGACAAGATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGAC 1117
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || || || |||||||| ||||||||| || |||
Sbjct 1116 AGAGTTCGACCATCCTCGAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGA---TCCGGG 1060
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || | ||||| || || || | ||| ||||||
Sbjct 1059 GGAATGCCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATGGTGTCGGACGATTCG 1000
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || ||||||||||| || |||| |||||||||||||| |||||
Sbjct 999 ACTTCCAGAGTGATCGTCTTGCCAGTCAACGTCTTGACGAATATTTGCAT 950
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| ||||| || | ||| ||||| ||||| || ||||| | ||| || || || ||
Sbjct 1389 AGGACGAGGTGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTCCGGCCATCC 1330
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | ||||||||| ||||| ||||| ||||| || | ||||| || || ||||||
Sbjct 1329 TCAAGTTGTTTTCCAGCGAATATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 1270
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
|| || || | || ||||| || || | ||| |||||| ||||| | ||| ||||||
Sbjct 1269 TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGATTCGACTTCCAACGTAATCGTC 1210
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| | ||||||||||| || |||||
Sbjct 1209 TTGCCGGTTAATGTCTTGACGAAGATTTGCAT 1178
Score = 96.9 bits (106), Expect = 8e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| | | ||| || ||||| | ||| ||||| || ||||| |||||||
Sbjct 948 CCACCGCGCAAGCGAAGGACAAGATGTAGCGTTGACTCTTTCTGAATATTGTAGTCGGAC 889
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | || || || || |||||||| || ||||||| || ||||| ||
Sbjct 888 AGGGTCCTGCCATCCTCCAACTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCGGGAGGA 829
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || || || || |||| ||| ||| |||||
Sbjct 828 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTATCGATAGTATCAGACGACTCTACC 769
Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449
|| || ||||||||||| || ||
Sbjct 768 TCAAGAGTGATCGTCTTGCCAGT 746
>seq1010
Length=27177
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|||||||| || || |||| ||||| || ||||| || | || || || |||||||||
Sbjct 25517 TTTTGGATGTTGTAATCGGACAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 25576
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| || |||||| || || || || |||||||| || || | ||| || || ||
Sbjct 25577 AGTCGTTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTGGATTTGACATTATCG 25636
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || ||| || || ||||| ||||| ||||| || || || ||||| |||||
Sbjct 25637 ATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTTACGAA 25695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179636549985718
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |